Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0057 ATGGGTTCTTTGGACACAACAAAGAAGACTATACCTCATGTTGTATGTATCCCATACCCAGCACAAGGTCACATAAATCCAATGCTTAAATTAGCAAAACTTCTTCATTTCAAAGGTGGTTTTCATGTTACCTTTGTTAACACTGAATTTAACCACAAACGTCTTCTAAAAGCTAGAGGTCCTAATTCTCTAAATGGCCTCTCATCTTTTCGTTTTGAAACTATTCCTGATGGTCTACCTGAGTCCGATGTCGATGCGACACAGGATATTCCTTCCTTGTGTGAGTCTACTAGTAAGACTTGCTTACCTCACTTTAAAAATCTTCTTTCTAAACTTAATAATGCTATAGACACCCCTCCTGTTACTTGCATAGTGTCTGATGGTGCTATGACTTTTACTTTGGATGCTGCTGAAGAACTTAATATCCCAGAAGTGCTTTTTTGGACAACAAGTGCTTGTGGCTTTATGTGTTACATGCAATATCGTCATCTCGTAGAAAAGGGCTTAACACCATTCAAAGAATCAAGTTTTATGACAAATGGATATTTGGAGACTACTATAAATTGGGTGCCAGGCATAAAAGAAATACGATTAAAGGATATTCCAAGTTTTATCAGAACTACAGATCCAAATGATCTTATGACTAATTTTTTAATAGGGGAGTGTCAGAGAGCTCAAAAAGCATCAGCAATAATTCTTAACACATTTGATAATCTAGAACACAACGTTTTAGAAGCATTCTCTTCCATTAATAATTTGCCTCCAGTTTATTCAATTGGTCCCTTGAATTTACTCTTAAAAGATGTAACACATAAGGAGTTGAATTCAATTGGTTCCAACCTTTGGAAAGAAGAGACAGAGTGTTTGGAATGGCTAAACAAAAAAGAACCAAACACTGTGGTTTATGTCAATTTTGGAAGTATCACTGTTATGACAAGTGAACAAATGATTGAATTTGCTTGGGGATTAGCTAATAGTAAAAAAACATTTTTATGGATAATAAGACCAGATCTTGTGGCTGGTGAAAATGCTGTTTTACCCCAAAAGTTTTTGGATGAGACCAAAAATAGAGGATTATTGTCAAGTTGGTGTGCACAAGAGGAAGTGTTGACTCATTCAGCAATTGGTGGGTTTTTGACACATAATGGTTGGAATTCAACGTTGGAAAGTGTGTGTAGTGGTGTTCCAATGATATGTTGGCCTTTTTTTGCAGAACAACAAACTAATTGTAGATTTTGTTGTAATGAATGGGAGATTGGTTTGGAAATTGAAGATGCTAAGAGAGATAAGATAGAGGATCTTGTGAGGGAATTGATGGATGGAGAAAAAGGTAAAGAGATGAAACAAAAGGCTTTGGAATGGAAGATATTGGCACAAAATGCTTCTTCTGGTCCACATGGATCATCTTTTGTGAATCTTGAGAATCTCATTTGTGATGTTCTCTTGTAA 1449 0.3589 MGSLDTTKKTIPHVVCIPYPAQGHINPMLKLAKLLHFKGGFHVTFVNTEFNHKRLLKARGPNSLNGLSSFRFETIPDGLPESDVDATQDIPSLCESTSKTCLPHFKNLLSKLNNAIDTPPVTCIVSDGAMTFTLDAAEELNIPEVLFWTTSACGFMCYMQYRHLVEKGLTPFKESSFMTNGYLETTINWVPGIKEIRLKDIPSFIRTTDPNDLMTNFLIGECQRAQKASAIILNTFDNLEHNVLEAFSSINNLPPVYSIGPLNLLLKDVTHKELNSIGSNLWKEETECLEWLNKKEPNTVVYVNFGSITVMTSEQMIEFAWGLANSKKTFLWIIRPDLVAGENAVLPQKFLDETKNRGLLSSWCAQEEVLTHSAIGGFLTHNGWNSTLESVCSGVPMICWPFFAEQQTNCRFCCNEWEIGLEIEDAKRDKIEDLVRELMDGEKGKEMKQKALEWKILAQNASSGPHGSSFVNLENLICDVLL* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0057 482 CDD GT1_Gtf-like 12 471 IPR002213 GO:0008194
Tpr3g0057 482 Gene3D Glycogen Phosphorylase B; 13 463 - -
Tpr3g0057 482 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 8 59 - -
Tpr3g0057 482 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 61 478 - -
Tpr3g0057 482 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 68 446 IPR002213 GO:0008194
Tpr3g0057 482 Gene3D Glycogen Phosphorylase B; 283 460 - -
Tpr3g0057 482 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 12 477 - -
Tpr3g0057 482 PANTHER GLYCOSYLTRANSFERASE 61 478 - -
Tpr3g0057 482 PANTHER GLYCOSYLTRANSFERASE 8 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0057 Tpr-Chr3 624171 626879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0057 1 482 Glycosyltransferase AT1G22380 62.680 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0057 - - gmx:100784251 798.505