Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g6040 ATGGTAATTGCAGAGGAGAGAGTAGTGGCGGTTATTATGGTTGGAGGACCCACCAAAGGTACTCGATTCCGTCCATTATCATTCAACGTTCCAAAACCACTTTTTCCATTAGCCGGACAACCCATGGTTCATCACCCAATCTCCTCCGCTTGTCAAAAAATTCCTAATTTGGCTAAGATTTATCTTATTGGATTCTATGAAGAACGCGAATTCGCATTATATGTATCCTCAATCTCCAACGAACTTAAACTACCTGTTAGGTACTTGAAGGAAGACAAACCACATGGTTCAGCTGGTGGTCTTTATAACTTTAAAGATCTAATCATGGAAGAAGATCCGGTTTTTTATCTTTACCTATCAATTTCTTATATGCTTGCTAACTACCTTGTATTAGTAATATGTTCATGTTCATGTTCATGTTCATGGGGTTCATCGTATTTTCTTTTGCAGTCGCATATTTTCTTGCTCAATTGTGATGTTTGCTGCAGTTTTCCACTCCCACAAATGCTTGATGCTCACAAAAAATATGGTGGCATGGGAACAATACTGGTTGTCAAGGTTTCTCCAGAATCAGCCAGCGAATTTGGGGAATTGGTAGCTGATCCAGTCACTAATGAACTCTTGCATTACACAGAGAAACCTGAAACTTTTGTTAGTGATCGTATAAATTGTGGTGTGTATATATTTACACCAGATATCTTTACTGCCATTGAGGGTGTTTCTTCTCAGCGGAAAGACAGAGCTAACTTAAGACGTGTCTCCAGTTTTGAAGCAATGCAGCCAGACTCAAGGAGTCTTACCGCCAATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCAGGGAAGAAACAGTTGTATATATATGAAACCGTGGATTTTTGGGAACAAATCAAAACTCCTGGAATGTCCATAAAATGTTCGGCCTTGTATCTTTCGCAATTTCGTCACACAGCCCCCCACCTATTAGAAAATGGAGATGGTATTAAGAAAGCCTGCATCATTGGTGATGTTTATATTCACCCATCAGCAAAAGTGCATCCGTCTGCAAAGATTGGTCCTGGCGTATCAATATCAGCAAATGCTCGTATAGGAGCTGGTGCAAGGCTCATAAATTGTATAGTCCTTGATGATGTCGAAATCAAGGAGAATGCTGTTGTTATTCATGCAATTGTTGGATGGAAATCCTCCATTGGACGATGGGCCCGTGTCCAGGGTCGTGGAGATTACAATGCAAAACTTGGGGTCACTATTCTTGGTGAATCTGTTGCTGTTGAGGATGAGGTAGTGGTTATTAATAGCACTGTCCTTCCACACAAGACCTTAAATGTCGGCGTTCAAGATGAGATTATATTATAG 1362 0.4053 MVIAEERVVAVIMVGGPTKGTRFRPLSFNVPKPLFPLAGQPMVHHPISSACQKIPNLAKIYLIGFYEEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYNFKDLIMEEDPVFYLYLSISYMLANYLVLVICSCSCSCSWGSSYFLLQSHIFLLNCDVCCSFPLPQMLDAHKKYGGMGTILVVKVSPESASEFGELVADPVTNELLHYTEKPETFVSDRINCGVYIFTPDIFTAIEGVSSQRKDRANLRRVSSFEAMQPDSRSLTANYVRLDQDILSPLAGKKQLYIYETVDFWEQIKTPGMSIKCSALYLSQFRHTAPHLLENGDGIKKACIIGDVYIHPSAKVHPSAKIGPGVSISANARIGAGARLINCIVLDDVEIKENAVVIHAIVGWKSSIGRWARVQGRGDYNAKLGVTILGESVAVEDEVVVINSTVLPHKTLNVGVQDEIIL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g6040 453 SUPERFAMILY Nucleotide-diphospho-sugar transferases 8 117 IPR029044 -
Tpr2g6040 453 Gene3D Hexapeptide repeat proteins 319 450 - -
Tpr2g6040 453 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 9 125 IPR029044 -
Tpr2g6040 453 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 142 315 IPR029044 -
Tpr2g6040 453 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 151 453 - -
Tpr2g6040 453 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 3 120 - -
Tpr2g6040 453 CDD M1P_guanylylT_A_like_N 10 312 - -
Tpr2g6040 453 SUPERFAMILY Nucleotide-diphospho-sugar transferases 151 395 IPR029044 -
Tpr2g6040 453 Pfam Nucleotidyl transferase 151 247 IPR005835 GO:0009058|GO:0016779
Tpr2g6040 453 Pfam Nucleotidyl transferase 10 115 IPR005835 GO:0009058|GO:0016779
Tpr2g6040 453 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 3 120 - -
Tpr2g6040 453 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 151 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g6040 Tpr-Chr2 73442590 73447559 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g6040 K00966 - gmx:100817201 736.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g6040 2 73442590 73447559 Tpr2g6040 2 73442590 73447559 ECH