Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5869 ATGCCAAGCAAACTAAGAAAAGCAATTGGAGCAGTAAAAGACCAAACAAGCATTAGCCTAGCAAAGGTAACAAATGCAGCAAATCTTGAGGTAACAATTCTTAAAGCAACAACACATGATAAAAATCCAATTGAAGAACGTTATGTACATGAAATTGTGAACATGGTATCTTCAAATAAAGCATATGCTGCTGAATGTGCACAATGCATAGGTAAAAGAATTGGCAAAACAAGAAATTGGGTTGTAGCCCTTAAATCTCTTATGATTGTCCTTAGAATATTCCAAGATGGTGATCCATATTTTCCTAGAGAAGTTTTTCATTCAATGAAAAGGGGTGCTAAAATTCTCAACCTTTCAAGTTTTAAAGATGATTCAAATTCTAGTCCTTGGGATTACACTGCATTTATAAGAACATTTGCATTGTACCTTGATGAACGTTTAGATTGTTTCCTAACAGGAAAGCTTCAACGACGATTCACATATGATACTCGGTTTCACGAAAAAATGCAAAGGAATGAACCTGGAATTAGAGACATGAAACCTACATTGATTCTTAATAGAATCACTTATTGGCAAAGGTTATTAGATAGAGCTATTGGCACAAGACCGACCGGTTCGGCCAAGAATAATCGGTTGGTTCAAATTTCTCTTTATGCTATTGTGCAAGAAAGTTTTGATCTTTACAAAGATATCTCTGATGGGCTTGGTGTTATTTTGGATAATTTCTTCAATTTACCACTTTCAGCTTGTGTTACTGCATTCAATGCATGTGTTAAATCATATAAACAATTTGATGAGTTATCTGGATTTTATTGTTTTTGTTTAAGCATTGGAATTGGAAGATCTTATGAGTATCCAACTATTCAAAAAGTTTCTGATGAGCTTATGGAGACATTACAAGCTTTCTTGAAAGATCAAGCTTCATTCCATACAAATAATAATGATTCTAAACAATTTATTGTTTCTCGTCACAAACGTTCTAATGCATCATGTTCAAGTTCATCTCAAAATCAATTAGGTATTGAAAGATATTTTGAAAATGGTTCTGAATTTGGATCTCAATGTACATCATTAGAAGATCTAATGAGTGCTACCGATGTAGCAGGAAGTTCGCGCGGTTCGCTTGAACATGATAGGTATTCTGAGGAATCTGATGAAGATGAGAAACAATCATCACAATATTATGATGATGAGTTTACTAGTGTGGATGCTAATGGTTCTTGTTCTATTAGATCATTTTCAATTGACCATAATTCAAGGTCAAGTCTTGATATATTAAGTGTTGATAATATGGATCATGATCAAGTTATGCATCATAATCAAACAAATGAATGTGAGAAATTACAAAACACAAAAAGTGGGTCTAATTCCAATGATAGTTCCAAAGATTGTTGGGAAATAGTGTTGGCAAAAACAGTAGTAAATACTAATGAAACACCATCACCTAAATTGGATAATGGAATTGACCCTTTTCTTGATTTATTTGATCAAGCTTTAGTACCTCAACAAAAATACAATCCATTTCTTGATGATGTTGGAACTTCAGATTCTCATCATGCCACCACTAGTGTTAGTATTGATGATATTTTTGATGTATCACTATCACCAACTTTTAAGGCATCAACTTCACCAACCTTTAAGGCTCATGACCCTCTTGAATTAACGGTCTCTAATCAAAATTCCAATTCTTTAACAAATTTGGATCTTATTTTTGGTGACTTATATTCAAATGACACAACAGTTGCACCAAGCTTTGAAGCTCAAAATTCTCTTCAAATGATTGTGGCACCAAGTTTTGAGGCTCAAAATTCTTTTAAGAATGTTTCAACACCAACTTTTCAAGTGCATAATTCAAATGATAATGCCATAGTAGAGTCATCAATCTATAGTGTTGAGAATCCTAATACTAGTATTGTTCCTTTTGATCCATATAGTAATTTTTATGATTCAACCGTGGCACCAACATTTAGTGCAAATGGTGGTAGTGAAACAACATTCACAACACAAATAAGAGAAGATGATCCATTTGGGCCATGGCCTAGTGCAACGACGAACGATCAAACGTCTAATGTGTCATCGATGCAAGATCAAACTTTGTCGCGGCTTCAACAATTGTGGTTAGAACAACAAAACAAGATTATTGCAAAACATATGACTTGA 2160 0.3375 MPSKLRKAIGAVKDQTSISLAKVTNAANLEVTILKATTHDKNPIEERYVHEIVNMVSSNKAYAAECAQCIGKRIGKTRNWVVALKSLMIVLRIFQDGDPYFPREVFHSMKRGAKILNLSSFKDDSNSSPWDYTAFIRTFALYLDERLDCFLTGKLQRRFTYDTRFHEKMQRNEPGIRDMKPTLILNRITYWQRLLDRAIGTRPTGSAKNNRLVQISLYAIVQESFDLYKDISDGLGVILDNFFNLPLSACVTAFNACVKSYKQFDELSGFYCFCLSIGIGRSYEYPTIQKVSDELMETLQAFLKDQASFHTNNNDSKQFIVSRHKRSNASCSSSSQNQLGIERYFENGSEFGSQCTSLEDLMSATDVAGSSRGSLEHDRYSEESDEDEKQSSQYYDDEFTSVDANGSCSIRSFSIDHNSRSSLDILSVDNMDHDQVMHHNQTNECEKLQNTKSGSNSNDSSKDCWEIVLAKTVVNTNETPSPKLDNGIDPFLDLFDQALVPQQKYNPFLDDVGTSDSHHATTSVSIDDIFDVSLSPTFKASTSPTFKAHDPLELTVSNQNSNSLTNLDLIFGDLYSNDTTVAPSFEAQNSLQMIVAPSFEAQNSFKNVSTPTFQVHNSNDNAIVESSIYSVENPNTSIVPFDPYSNFYDSTVAPTFSANGGSETTFTTQIREDDPFGPWPSATTNDQTSNVSSMQDQTLSRLQQLWLEQQNKIIAKHMT* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5869 719 Gene3D - 2 155 IPR008942 -
Tpr2g5869 719 SUPERFAMILY GAT-like domain 173 301 - -
Tpr2g5869 719 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 717 IPR045192 GO:0048268|GO:0072583
Tpr2g5869 719 SUPERFAMILY ENTH/VHS domain 28 150 IPR008942 -
Tpr2g5869 719 Gene3D ANTH domain 168 325 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Tpr2g5869 719 MobiDBLite consensus disorder prediction 372 388 - -
Tpr2g5869 719 SMART enth_2 27 157 IPR013809 -
Tpr2g5869 719 CDD ANTH_N_AP180_plant 29 150 - -
Tpr2g5869 719 PANTHER CLATHRIN COAT ASSEMBLY PROTEIN AP180 1 717 - -
Tpr2g5869 719 MobiDBLite consensus disorder prediction 366 396 - -
Tpr2g5869 719 Pfam ANTH domain 29 305 IPR011417 GO:0005543
Tpr2g5869 719 ProSiteProfiles ENTH domain profile. 21 157 IPR013809 -
Tpr2g5869 719 MobiDBLite consensus disorder prediction 670 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5869 Tpr-Chr2 70266605 70269295 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5869 - - mtr:MTR_3g080490 959.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5869 2 70266605 70269295 Tpr2g5869 2 70266605 70269295 ECH