Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5608 ATGTTCCCTATAGTGCATGTTAGTGGCAAGGAAATGACAATGGGTGATAGTGAGAATGAGAATGGAAAAATCATTGGGAAGTGGAACAAACATGTGCATGTTTTTGGTGAGAGGCTAAGGAAAGTTCCTAGTTTGGTTTGGAAGACTACATGGAATGTTGGTTATGAAGATCCAAGAAGAGTGATTCATGCATTCAAAGTTGGTTTGTCTCTCACTTTAGCTTCTTTGTTGTATTTGTTGGAGCCACTTTACCATGAGATTGGGCAAAGTGCAATTTGGGCTGTCATGACTGTGGTTGTTGTGCTTGAGTTCACTTCTGGGGCAACTTTATGCAAAGGGCTTAACAGAGCATTGGGGACACTGTTAGCTGGATTATTGGCATTCATTGTTAGCTATATTGCAACTGCATCATCTGATCGGATCTTTCAAGCTGTTATCATTGGAGCCGCAATTTTTTTTATAGGAGGTTTATCTACTTATATGAGATTCATTCCCTATATAAAGAAGAACTATGACTATGGCCTAGTTATATTTCTCATGACATTTAACTTGATTGCTTTGTCAAGCTACCGTGTCGACAGTGTGTTGAAGATAGCACACGAACGCTTATCCTCCATTGCTATAGGTTGTGCCATTTGCCTTATAATGAGTCTATTGATGTTTCCAAATTGGTCAGGAGAAGACCTGCACAATTCTACTGCTTTCAAGCTTGAAGGCCTTGCCAAATCTATAGAGGCTTGTGTCAATGTATATTTTTATGGAGAAGTTGATACCAACGGAGATAACAAATCGTCTGAAGATCCCATATACAAAGGTTATAAAAATGTTTTGGATTCAAAATCCATTGATGAAACACTGGCATTGCATGCAAGTTGGGAGCCAAGGCATTCTTGTCACAGATTTCCATGGCAGCAGTATGTAAAAGTTGGAGCCATTCTTCGCCAATTCGGCTACACCGTGGTAGCTCTACATGGTTGTTTGAGATCAGAAATTCAGACGCCAAGATCAGTCAGAGCCATGTTCAAGGATCCATGCATAAGGCTTGCAGCAGAAGTATCAAAAGTACTAATAGAACTTTCCAACAGTATAAGAAACCGTCGCCATTGCTCGCCTGAAATACTCTCTGATCATCTTCATGAAGCCTTGCAGGATCTCAACACTGCCATAAAATCTCAACCTCGTCTCTTCTTAGGCCCGAAACACAAACACAACCATGCAAACAACATGCTCAAAATAGCTGCTGCACAAGTTGAACAAGGTAGACAAGGAAAAACCTCAGGATTCTCGTTATCGAGTGTTAAAACTGATTCTTCTGCATTGTTTGAATGGAAAACCAAAAGAGATTCATTAATGCAGTTGAAGGAAAACGAAAGAAAGTCTTTGAGACCTCAATTGAGTAAAATTGCAATCACTAGTCTTGAATTCTCTGAGGCACTTCCTTTTGCTGCTTTTGCATCTTTGCTTGTGGAAACAGTTGCAAAATTGGATCTTGTGATCGAGGAAGTTGAAGAACTTGGGAGATTAGCTTGCTTTAAAGAGTTTACACCTGGTGATGAGATTGTTGTGACTTGTGAGGAACCACGGGTTGATGTTTCGCGCAACAACTTACCTTCTCATGGAATGGAATAG 1629 0.4021 MFPIVHVSGKEMTMGDSENENGKIIGKWNKHVHVFGERLRKVPSLVWKTTWNVGYEDPRRVIHAFKVGLSLTLASLLYLLEPLYHEIGQSAIWAVMTVVVVLEFTSGATLCKGLNRALGTLLAGLLAFIVSYIATASSDRIFQAVIIGAAIFFIGGLSTYMRFIPYIKKNYDYGLVIFLMTFNLIALSSYRVDSVLKIAHERLSSIAIGCAICLIMSLLMFPNWSGEDLHNSTAFKLEGLAKSIEACVNVYFYGEVDTNGDNKSSEDPIYKGYKNVLDSKSIDETLALHASWEPRHSCHRFPWQQYVKVGAILRQFGYTVVALHGCLRSEIQTPRSVRAMFKDPCIRLAAEVSKVLIELSNSIRNRRHCSPEILSDHLHEALQDLNTAIKSQPRLFLGPKHKHNHANNMLKIAAAQVEQGRQGKTSGFSLSSVKTDSSALFEWKTKRDSLMQLKENERKSLRPQLSKIAITSLEFSEALPFAAFASLLVETVAKLDLVIEEVEELGRLACFKEFTPGDEIVVTCEEPRVDVSRNNLPSHGME* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5608 542 Pfam Aluminium activated malate transporter 51 506 IPR020966 GO:0015743
Tpr2g5608 542 PANTHER ALUMINUM ACTIVATED MALATE TRANSPORTER FAMILY PROTEIN 1 538 - -
Tpr2g5608 542 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5608 Tpr-Chr2 64889286 64892493 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5608 5 527 Miscellaneous Gene Families AT4G17970 60.498 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5608 - - mtr:MTR_5g014310 959.903