Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5606 ATGAGTGGCATAGCGTTGACACCCACAGCTTTCAATCCCATAATCCCATCTTCATCTTCTTCTTGTTCTTCATCTCTCAAATCTCACAAATTCATCAAAACAAGAACCAAACTCACACAATTCAACAACAACGCTATTTCAATTTCCTCAGACCCATTCCTTCTCAACCTCGCAGAAACATTAGAAGATTCCATCCCTACACCACAACCTCTCCAGAATCTTCGAGAAGCTTCCTCAGAATCACTTCTCTCAACTCCATGGCCTTCTCGAAGAGACGAACCCTTTCGTTTCACAGACCTTTCCTTCCTTCGCTCTTCCCATATCCTACCCGCCCCAATCCCAACCACAACCACCACCACCGTTACGCCGCCATTCTCCGATGATGATGATCAATTCCCTTGCCACATCAGCTTCATCGACGGTCATTTCATAAACTCAATGTCGAAAAATTTGGAATTTCCAGATGGGGTTTACGTTGGTAGTTTATTGAATTTGAGTGGTAAAGTTGCTGAAAGGGTTTTAGAATTGGTTTCTGGATTGGACGGTGGTGATTTGTTTTGGTCGATTAATGGTATGGCTGCACCTGATTTGATGGTGGTTTATGTGCCCGAGGGTGTTCGAGTTGAAAATCCGGTTCATTTGGGTTATTTATCCTTGCTGGGTAGTAAGGATGGTTCCAAAGATTTGTATATTTCGAATCCGAGGGTTTTGGTTGTGGTGGAGAAAGGTGGAGAGGTTGATATAGTTGAAGAGTTTTCTAATGATGAAGAGAATGAGAATGAGTTTTATTGGAGTAATGCTGTTTTGGAGGTTGTGATTGGGGAAGGTGGTAAGGTTAGGCATTCTTATATTCAGACTCAGTCATTGCTTGCTGCACATATCAAATGGACTTCCGTTCGTCAGGAGTCATCTAGTACATATGAGCTTACAGAGGTAAGCACAGGAGGCAAACTAGGAAGGCACAATCTTCATATCAAACAACTAGGTCCAGACACGGTGACAGAGTTATCTACTCTACACTTGTCTGTTGGTAATCAAACACAGGATCTTCACAGTAGTCTTGTATTGGATCATCCAAGGGGTTTTTCCCGTCAGCTTCATAAGTGCATCGTAACTCATTCACAGGGACAAGCAGTTTTTGATGGAAACGTTAAGGTTAACAGGTATGCTCAGCAGACAGATGCAGGACAATTAACAAGAAGCCTTCTTCTTGAACCTCGTGCAACTGTAAATGTTAAACCAAATCTCCAAATCATCGCTGATGATGTAAAGTGTTCCCATGGAGCTGCAATAAGTGACTTGGAACAGAGCCAACTCCTGTATTTCCAAGCACGTGGCATTGATTCAGCAACAGCTAGAAGGGTTCTAATTTTTGCCTTTGGAGGGGAAGTGATAGATAAGTTTCCTTATTCTTCTGTTAGAGATAGAGTACGAAGTCAGATTAAAAGTTTATTGGATCCATCTCCTAAATTAGCACCATTATAG 1485 0.4215 MSGIALTPTAFNPIIPSSSSSCSSSLKSHKFIKTRTKLTQFNNNAISISSDPFLLNLAETLEDSIPTPQPLQNLREASSESLLSTPWPSRRDEPFRFTDLSFLRSSHILPAPIPTTTTTTVTPPFSDDDDQFPCHISFIDGHFINSMSKNLEFPDGVYVGSLLNLSGKVAERVLELVSGLDGGDLFWSINGMAAPDLMVVYVPEGVRVENPVHLGYLSLLGSKDGSKDLYISNPRVLVVVEKGGEVDIVEEFSNDEENENEFYWSNAVLEVVIGEGGKVRHSYIQTQSLLAAHIKWTSVRQESSSTYELTEVSTGGKLGRHNLHIKQLGPDTVTELSTLHLSVGNQTQDLHSSLVLDHPRGFSRQLHKCIVTHSQGQAVFDGNVKVNRYAQQTDAGQLTRSLLLEPRATVNVKPNLQIIADDVKCSHGAAISDLEQSQLLYFQARGIDSATARRVLIFAFGGEVIDKFPYSSVRDRVRSQIKSLLDPSPKLAPL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5606 494 PANTHER PROTEIN ABCI7, CHLOROPLASTIC 36 488 IPR011542 GO:0016226
Tpr2g5606 494 Pfam SufBD protein N-terminal region 69 214 IPR045595 -
Tpr2g5606 494 Pfam SUF system FeS cluster assembly, SufBD 232 460 IPR000825 GO:0016226
Tpr2g5606 494 SUPERFAMILY Stabilizer of iron transporter SufD 64 486 IPR037284 -
Tpr2g5606 494 TIGRFAM sufD: FeS assembly protein SufD 197 476 IPR011542 GO:0016226
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5606 Tpr-Chr2 64878582 64882136 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5606 K09015 - csv:101222108 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5606 2 64878582 64882136 Tpr2g5606 2 64878582 64882136 ECH