Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5601 ATGGCAGCAACTATTCATCTTTCTTCCACTGCGTCTTCTCTATTCAACAATATCAATCTCACTTCCTCCAATTCAATCTCTCAAAAACAACTTCCATTTCATTCTAAGCCCCCTCCATCCAAACGCAGCTCAACTCTCACCATAGCCCAACTAACCTCTCCTCCTCCTCCTCCTCCTGGCAATGACTACTACAACAACTCTTCTTTACTTTATGGTATAGGAAGAACAGTTGAAGGATCAGATGAACGCACCAAAACTAAAATCGTTTGTACAATTGGTCCGTCTACTAGCTCACGTGACATGATTTGGAAACTTGCAGATATGGGAATGAATGTTGCACGTTTGAATATGTCACATGGAGACCACACTTCCCACCAGAAAACTATTGATTTTGTTAAACAATACAATTCTCAATTTCAAGACAGAGTTATCTCCATCATGCTTGATACCAAGGGTCCTGAAGTTAGAAGTGGGGATGTGCCACAACCAATATTACTCAAAGAGGGGCAAACATTCAATTTCACTAATAATAGAGGGGTTTGCACACAAGATACTGTTAGTGTTAATTATGATGATTTTGTCAATGATGTTGAGGATGGAGATGTACTTCTCGTCGATGGAGGAATGATGTCTCTTGTTGTTAAGTCAAAGACAAAAGACTTGGTTAAATGTGAAGTAATTGATGGCGGAGAGCTGAAATCTAGGCGCCATTTGAATGTCCGTGGAAAAAGTGCAACACTTCCTTCCATAACTGAGAAGGACTGGGAAGATATCAAGTTTGGGGTAGACAATCAAGTAGACTTCTATGCTGTATCATTTGTCAAGGATGCTAGAGTGGTTTATGAGTTAAAAGACTATCTCAAAAGACACAATGCTGATATACATGTGATTGTAAAAATTGAAAGTGCAGATTCAATACCAAATCTTCATTCCATACTTTCAGCTTCAGATGGGGCTATGGTTGCTCGTGGGGACCTTGGAGCTGAACTTCCGATCGAGGAAGTTCCTTTATTGCAGGAGGACATCATTAGAAGATGTCGCAGAATGCAAAAACCAGTTATTGTGGCAACAAATATGCTCGAAAGCATGATTATTCATCCGACACCAACTAGGGCGGAAGTTTCAGACATTGCTATTGCAGTAAGACAAGGTGCTGATGCTGTCATGCTTTCAGGAGAAACTGCACATGGAAAATTTCCACTGAAAGCTGTTAAAGTTATGCATGCCGTGGCTGTAAGGAATGAATCTACTGTTTTAAGAAGTGATGCTTATCCTAATCATTTGAGTTCCCACAAGAGCCATATGGGAGAAATGTTTGCTTTCCATGCAACAACTATGTCTAATACTCTTAATACTCCTATTATTGTGTTCACCAGAACTGGATCCATGGCTATTCTTTTGAGCCATTATAGGCCCTACTCGACAATATTTGCATTCACAAATGAAAGAAGGATTAAGCAAAGGTTGGGACTTTATCATGGTGTGATGCCTATATACATGCAATTTTCAAATGATGCTGAGGAGACTTTTGCTAGAGCTCTAAAGCTACTATTGAGTAAAGGTCATTTAAATGAGGGACAATATGTTACTCTTGTTCAAAGCGGAGCGCAACCAATTTGGCGTGATGAATCCATTCACCACCTTCAAGTTCGCGAGGTTCATGAATAA 1668 0.3993 MAATIHLSSTASSLFNNINLTSSNSISQKQLPFHSKPPPSKRSSTLTIAQLTSPPPPPPGNDYYNNSSLLYGIGRTVEGSDERTKTKIVCTIGPSTSSRDMIWKLADMGMNVARLNMSHGDHTSHQKTIDFVKQYNSQFQDRVISIMLDTKGPEVRSGDVPQPILLKEGQTFNFTNNRGVCTQDTVSVNYDDFVNDVEDGDVLLVDGGMMSLVVKSKTKDLVKCEVIDGGELKSRRHLNVRGKSATLPSITEKDWEDIKFGVDNQVDFYAVSFVKDARVVYELKDYLKRHNADIHVIVKIESADSIPNLHSILSASDGAMVARGDLGAELPIEEVPLLQEDIIRRCRRMQKPVIVATNMLESMIIHPTPTRAEVSDIAIAVRQGADAVMLSGETAHGKFPLKAVKVMHAVAVRNESTVLRSDAYPNHLSSHKSHMGEMFAFHATTMSNTLNTPIIVFTRTGSMAILLSHYRPYSTIFAFTNERRIKQRLGLYHGVMPIYMQFSNDAEETFARALKLLLSKGHLNEGQYVTLVQSGAQPIWRDESIHHLQVREVHE* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5601 555 PANTHER PLASTIDIAL PYRUVATE KINASE 3, CHLOROPLASTIC 77 554 - -
Tpr2g5601 555 Gene3D - 153 248 IPR015806 GO:0004743|GO:0006096
Tpr2g5601 555 Gene3D - 415 533 IPR036918 -
Tpr2g5601 555 TIGRFAM pyruv_kin: pyruvate kinase 85 537 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 ProSitePatterns Pyruvate kinase active site signature. 294 306 IPR018209 GO:0004743|GO:0006096
Tpr2g5601 555 SUPERFAMILY PK beta-barrel domain-like 153 244 IPR011037 -
Tpr2g5601 555 Pfam Pyruvate kinase, alpha/beta domain 444 533 IPR015795 -
Tpr2g5601 555 PANTHER PYRUVATE KINASE 77 554 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 Gene3D - 85 414 IPR040442 -
Tpr2g5601 555 PRINTS Pyruvate kinase family signature 142 158 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 PRINTS Pyruvate kinase family signature 266 280 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 PRINTS Pyruvate kinase family signature 296 322 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 PRINTS Pyruvate kinase family signature 323 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 PRINTS Pyruvate kinase family signature 348 372 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 PRINTS Pyruvate kinase family signature 373 391 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 PRINTS Pyruvate kinase family signature 392 408 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 Pfam Pyruvate kinase, barrel domain 85 419 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Tpr2g5601 555 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 82 418 IPR015813 GO:0003824
Tpr2g5601 555 SUPERFAMILY PK C-terminal domain-like 402 535 IPR036918 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5601 Tpr-Chr2 64831238 64834955 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5601 K00873 - gmx:100776984 826.239