Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5598 ATGAAGGGAAGAAGAGGAAGAAGATCAGAGGCTTTTTGGCCTTCCATTGTGATGAAAAAATGGCTTAATATTAAGCCTAAAGTGAATGATTTTAGTGAAGATGAAGTTGACACTGAAACTGAGAGTGAAGATGATGCATGCTCTCCTAAACAATCAAGAATGCAAATTTCCGACGATAGTCCGTTTAGAACACAAGGGATTCAATCTCAATCTATATTCTCAAGTCAAATACCAGATGCATCTTTCAAGAAGGAATACAAGATAAAACACAAAAGAGGAAAATCAGAAACTCTGCGTGCTCAGTATATAAATACTAAGGAAGTGAGGGTAGCAATTGGATCTTGGAATGTTGCTGGAAGACATCCATCTGAGGATCTTGATATTGATGATTGGATTTGTGCTGAAGAACCAAGTGACATTTACATTTTTGGTTTCCAGGAAGTAGTTCCACTGAATGCTGGAAATGTACTAGGAGCAGAAGATAATACACCAATCCAAAAATGGGAAGCAATCATTAGAAGATCTCTAAACAAATCTTCCGAGCCTGACAGCAAACATAAAAGCCACAGCGCGCCACCTTCTCCGGTTTTGCGAACTTCTTCAGCTGCAGATGTTCTAGCTGATAATATAGATGCTACTAATCCAATTGATATGATGAATGGCGAGTTCTTGGATAATGTTGTTGAAAAATATGATCTGCAAAAGCTCGAAGCAAATAACATAATTAGCATAGGGAATGATTTACATGTAAGGAAAGTTTATGGTATTGATCTTGATTGGCCCGAACGTCCGTTAGACGCAATCTCACAAATTGTTGATTCGAATCCGAAGTTGAGGAGAGTACTAAGTAGTAATGCTAGAATTGGCTTTGACTTGAATGATAATGCTTTCATATACGGCGGTGGTGGTGGAGGTGGATTGAAACGTATGCACCATAGTTTCGAAGATTTAGCTTTGTTATTGAAAGAGCAAAAAGTTATACCTAAAGTAGTTGATTCCTTAGATGATGTATCTGAGATATTGTCTGATGAGGGTGATGATGCTTTTATTGAATTACCTGAGAACCAAGATGATAATGGATTAGGTGAGACGAAATCGCACGCGAGGTATGTTCGGATTATCAGCAAGCAAATGGTGGGAATATATGTATCTGTTTGGGTGCAGAGAAGATTGAGAAGACACATAAATAATTTGAAAGTTTCTCCTGTTGGAGTTGGGCTTATGGGCTACATGGGAAACAAGGGTTCTGTTTCGATAAGTATGTCACTCTTTCAGTCACGTATGTGCTTTGTTTGTTCTCATCTGACTTCTGGTACAAAAGATGGAGCTGAACAAAGACGAAACTCTGATGTTAATGAAATTCTACGACGCACTTGCTTCTCATCCGTCTTTGGTACAGATCAAGCACTAACAATTCCAGCACACGATCAGATTTTCTGGTTCGGAGACTTGAATTATCGGATCAGTATGTTAGATTCGGAGGTTCGAAAATTGGTGGCTCTAAAAAAATGGGATGAACTAATGAACTATGATCAGCTAAGCAATGAATTGCGTGTTGGGCGTGTATTCGATGGATGGAAAGAAGGCTCGATAAACTTTGCGCCAACTTACAAATATGAAATTAACTCTGATAGATATGTTGGCGAGATTCCAAAAGAAGGGGAGAAAAAAAGAGCTCCTGCATGGTGTGACAGAATATTATGGCTAGGAAAAGGAATAAAGCAACTACAATACGAACGCGCAGAAATTAAGCTCTCGGATCATAGACCAGTTAGTTCAATTTTCTCAGTTGAAGTTGAAGTATTCGATCATCGCAAATTAAGACGCGCACTAAATTTCACTAGTACTGCTGCAGTACATCCTGAGATTTTTCCTGATGAAGATGGTCAATTTTTCTAA 1899 0.386 MKGRRGRRSEAFWPSIVMKKWLNIKPKVNDFSEDEVDTETESEDDACSPKQSRMQISDDSPFRTQGIQSQSIFSSQIPDASFKKEYKIKHKRGKSETLRAQYINTKEVRVAIGSWNVAGRHPSEDLDIDDWICAEEPSDIYIFGFQEVVPLNAGNVLGAEDNTPIQKWEAIIRRSLNKSSEPDSKHKSHSAPPSPVLRTSSAADVLADNIDATNPIDMMNGEFLDNVVEKYDLQKLEANNIISIGNDLHVRKVYGIDLDWPERPLDAISQIVDSNPKLRRVLSSNARIGFDLNDNAFIYGGGGGGGLKRMHHSFEDLALLLKEQKVIPKVVDSLDDVSEILSDEGDDAFIELPENQDDNGLGETKSHARYVRIISKQMVGIYVSVWVQRRLRRHINNLKVSPVGVGLMGYMGNKGSVSISMSLFQSRMCFVCSHLTSGTKDGAEQRRNSDVNEILRRTCFSSVFGTDQALTIPAHDQIFWFGDLNYRISMLDSEVRKLVALKKWDELMNYDQLSNELRVGRVFDGWKEGSINFAPTYKYEINSDRYVGEIPKEGEKKRAPAWCDRILWLGKGIKQLQYERAEIKLSDHRPVSSIFSVEVEVFDHRKLRRALNFTSTAAVHPEIFPDEDGQFF* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5598 632 MobiDBLite consensus disorder prediction 32 63 - -
Tpr2g5598 632 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 7 626 IPR045849 GO:0004445|GO:0046855
Tpr2g5598 632 MobiDBLite consensus disorder prediction 49 63 - -
Tpr2g5598 632 MobiDBLite consensus disorder prediction 178 198 - -
Tpr2g5598 632 SMART i5p_5 315 603 IPR000300 GO:0016791|GO:0046856
Tpr2g5598 632 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 2 7 626 - -
Tpr2g5598 632 Gene3D Endonuclease/exonuclease/phosphatase 329 622 IPR036691 -
Tpr2g5598 632 Gene3D Endonuclease/exonuclease/phosphatase 88 192 IPR036691 -
Tpr2g5598 632 SUPERFAMILY DNase I-like 99 613 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5598 Tpr-Chr2 64821754 64826588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5598 370 609 Acyl Lipid Metabolism Gene Families AT1G65580 31.206 1.89e-34 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5598 K24221 - ccaj:109800886 942.184