Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5592 ATGGATGACATACCGGGATATGTACGTTACTGTTTGAACACAGGGAAGCTTCTCTTTTTAGCCATTTTGGTCTCAGGAGGAATCGTCTTGCAAATTCTGGCATGTGCTTTGTATAATAATTGGTGGCCGATGCTTAGTGCTATAACGTACGTGCTTCTTCCGATGCCTTTGCTGTTCTTTGCTGGGTCTGATGGTTCTTCAATATATTCTGAATCTGATAATAGCTGGGTGAATTTTGCCAAGTTCTTGACCGGAGCATCAACTCTCGGAGGCATTGCCATTCCGAGCATATTAAAACATGCCGGGGTGATTGGTTGGGCAGCCTTTGCAATGGAACTGTCTTCCTTCTTTGTGTTCGTATTAGCCATATATATTGTGTTTCCTGTGGCTGAGTGA 396 0.4369 MDDIPGYVRYCLNTGKLLFLAILVSGGIVLQILACALYNNWWPMLSAITYVLLPMPLLFFAGSDGSSIYSESDNSWVNFAKFLTGASTLGGIAIPSILKHAGVIGWAAFAMELSSFFVFVLAIYIVFPVAE* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5592 131 PANTHER LEPTIN RECEPTOR-RELATED 1 127 IPR007262 -
Tpr2g5592 131 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 55 HOMOLOG 1 127 - -
Tpr2g5592 131 Pfam Vacuolar protein sorting 55 18 127 IPR007262 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5592 Tpr-Chr2 64741823 64742795 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5592 1 123 EF-hand Containing Proteins AT1G32410 73.171 4.02e-64 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5592 - - gmx:100500037 215.312