Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5587 ATGGCGCCAGTTTCAGCTCTAGCGAAATACAAGCTGGTATTCTTGGGTGACCAATCCGTTGGCAAAACCAGCATCATCACTCGCTTCATGTACGATAAGTTCGACAATACGTATCAGGCAACAATTGGCATTGATTTTCTATCGAAAACCATGTATCTTGAAGATCGAACTATTCGACTACAGTTGTGGGATACAGCTGGACAAGAAAGATTTAGAAGTCTTATTCCAAGCTACATCAGGGACTCAACTGTAGCTGTTGTTGTGTATGATGTTGCGAGTCGGCAGACTTTCCTGAACACAACAAATTGGATTGAAGAGGTGCGAACAGAAAGAGGCAGTGATGTCATTATTGTTCTTGTTGGGAACAAAACTGATCTCGTTGAGAAGAGACAAGTCTCCATAGAGGAAGGGGAAGCAAAAGCACGAGAGCTGAATGTCATGTATATTGAAACTAGTGCTAAAGCTGGATTTAATATTAAGGCCCTTTTTCGGAAAATTGCTGCTGCATTACCTGGAATGGAAACAGTATCTTCTGCAAAACAAGAGGGCATGGTTGATGTAAACTTAAAATCTTCTGGTGGCCATGAATTTCAACCTCACTCTGGTGGATGTGATGTTCTTGCTGAATGTGCCTTATCACGATCACGATGTTCGTGGATATTTATGATTTATTTTATTTGCTTTGAACTGTATTAA 696 0.4066 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDVASRQTFLNTTNWIEEVRTERGSDVIIVLVGNKTDLVEKRQVSIEEGEAKARELNVMYIETSAKAGFNIKALFRKIAAALPGMETVSSAKQEGMVDVNLKSSGGHEFQPHSGGCDVLAECALSRSRCSWIFMIYFICFELY* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5587 231 Pfam Ras family 11 169 IPR001806 GO:0003924|GO:0005525
Tpr2g5587 231 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 177 IPR027417 -
Tpr2g5587 231 SMART rab_sub_5 10 173 - -
Tpr2g5587 231 CDD Rab6 10 170 - -
Tpr2g5587 231 Gene3D - 6 195 IPR027417 -
Tpr2g5587 231 SMART rho_sub_3 12 172 IPR001806 GO:0003924|GO:0005525
Tpr2g5587 231 TIGRFAM small_GTP: small GTP-binding protein domain 9 166 IPR005225 GO:0005525
Tpr2g5587 231 PRINTS Transforming protein P21 ras signature 10 31 - -
Tpr2g5587 231 PRINTS Transforming protein P21 ras signature 33 49 - -
Tpr2g5587 231 PRINTS Transforming protein P21 ras signature 51 73 - -
Tpr2g5587 231 PRINTS Transforming protein P21 ras signature 113 126 - -
Tpr2g5587 231 PRINTS Transforming protein P21 ras signature 148 170 - -
Tpr2g5587 231 SMART ras_sub_4 7 173 - -
Tpr2g5587 231 ProSiteProfiles small GTPase Rho family profile. 3 176 - -
Tpr2g5587 231 SMART ran_sub_2 15 212 - -
Tpr2g5587 231 PANTHER GTP-BINDING PROTEIN RAB6 1 205 - -
Tpr2g5587 231 ProSiteProfiles small GTPase Rab1 family profile. 5 204 - -
Tpr2g5587 231 PANTHER DRAB5-RELATED 1 205 - -
Tpr2g5587 231 ProSiteProfiles small GTPase Ras family profile. 5 208 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5587 Tpr-Chr2 64706125 64710043 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5587 K07893 - qsu:112012683 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5587 2 64706125 64710043 Tpr2g5587 2 64706125 64710043 ECH