Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5584 ATGGCTGATACGGTGGAGCTTCCGAGTCGGTTAGCAATTCTTCCTTTCAAGAACAAAGTTCTATTACCTGGTGCCATCATCCGAATTCGTTGCACTTCACCTACCAGTGTGAAGTTGGTGGAACAAGAACTATGGCAACGAGAAGAGAAAGGGATGATTGGTATTTTGCCAGTACGTGATACTGCTGCTGCTTCTGAAACTCCTACTGTATCAGATTCTGTTGACCAAACCTCAAAAGTTCATGGTGGTTCATCAGATTCTAATACCAAAGTTCAAAATGATGTTCATTGGCATAACAGGGGGGTAGCTGCTCGAGCGTTACACTTATCGAGGGGAGTGGAGAAACCAAGTGGGAGGGTCACATATATAGTTGTTCTTGAAGGTTTGTGCAGATTTAATGTACAGGAACTAAGCACAAGAGGAACATACCATACCGCAAAAATATCTTCCCTTGAGATGACTAAGACCGAGATGGAACAGGTGGAGCATGACCCAGATTTTATAATGTTATCACGTCAATTTAAAGCAACAGCCATGGAGCTTATTTCTGTTCTGGAGCAGAAACAAAGTACCGGTGGACGGACGAAAGTTCTTTTGGAGACTGTTCCGGTTCACAAGTTGGCTGATATATTTGTTGCTAGCTTTGAGATAAGTTTTGAAGAACAACTATCAATGTTGGATTCTGTTGATGCTAAAGTGAGGCTTTCAAAAGCAACTGAATTGGTTGATAGGCATTTACAGTCAATACGTGTAGCTGAGAAAATTACACAAAAAGTTGAAGGACAATTGTCAAAATCTCAAAAAGAGTTTCTTCTGCGCCAGCAGATGAAAGCTATAAAGGAGGAACTTGGTGATAATGATGATGAGGAGGATGACCTGGCTGCCTTGGAAAGGAAGATGCAAAGTGCAGGAATGCCACAAAATACCTGGAAGCTTGCTATTAGAGAGTTCAGGAGATTGAAAAAAATGCAGCCTCAGCAACCTGGTTATAGCAGTTCACGGGCTTACCTGGAACTTCTTTCTGATCTGCCATGGCAGAAGGCCAGCAAAGAGCATGAACTGGACTTAAGAGCTGCACAAGAGCGCCTGGACAATGATCACTATGGTTTAGTGAAGGTCAAGCAACGGATCATTGAATACCTAGCTGTTCGTAAGCTTAAACCAGATGCAAGAGGTCCTGTGTTGTGCTTTGTTGGACCTCCCGGTGTTGGGAAAACTTCATTGGCATCTTCTATTGCTGCTGCTCTGGACCGAAAATTTGTGCGCATATCCCTTGGTGGAGTCAAGGATGAGGCTGATATTAGAGGACATAGGAGAACATACATTGGAAGCATGCCTGGGAGGCTTATAGATGGACTGAAGAAAGTAGCTGTTTGCAATCCCGTCATGTTGCTAGATGAAATCGACAAGACAGGTTCTGATGTTCGTGGGGATCCAGCTTCAGCGTTGCTAGAAGTTCTTGATCCTGAACAAAATAAAACATTCAATGATCACTATTTGAATGTTCCGTTCGATCTATCCAAGGTAATTTTTGTTGCTACAGCAAATAGGGCACAACCTATTCCTCCACCTCTCCTTGACAGGATGGAAGTCATCGAGCTTCCTGGGTATACACCCGAGGAAAAGCTCAAAATAGCCATGCGGCATTTAATTCCAAGAGTTCTGGACCAACATGGATTGAGTTCTGAGTTTCTTCAAATTCCAAAGGCGATGGTGCAACTTGTTATTCAGAGATATACTAGGGAAGCTGGTGTTCGAAGTTTGGAAAGGAATCTAGCTGCCCTTGCTCGTGCTGCTGCAGTGAGAGTAGCAGAGCAAGAACAAGTAGTTCCACTTAGCAAAGGAGTAGAGGGACTTAGTACACCGCTTCTTGAAAACAGACTTGTCGATAGCGCTGAAGTGGAAATGGAAGTGATACCAATGGGTGTCAACAACCGTGACATTTCAAACACATTTAGGATCACTTCTCCACTGGTTGTTGATGAAACTATGGTTGAAAAAGTGCTTGGGCCTCCAAAGTTTGATGGAAGAGAAACAGCAGAACGTGTTGTAACCCCTGGGATATGTGTTGGGCTGGTTTGGACTACTTTTGGTGGAGAAGTTCAGTTTGTGGAGGCTTCAACAATGGTAGGGAAGGGTGAATTGCATCTTACTGGACAACTTGGTGATGTGATCAAAGAATCAGCTCAAATTGCACTAACATGGGTAAGAGCAAGGGCAGCTGATCTCAAACTGACTTCTGCGGAGGGCATTAATCTGTTGGAGGGTCGTGATATACATATACATTTTCCTGCAGGTGCAATACCTAAAGATGGGCCTTCAGCTGGTGTAACTTTGGTCACAGCATTGGTTTCTCTTTTCAGTAAGAGAAAAGTGAGATCTGATACCGCTATGACTGGAGAGATGACGTTGAGGGGTCTAGTACTACCTGTCGGTGGTATCAAGGATAAGATACTAGCTGCACATCGGTATGGTATTAAGAGAGTCATTCTACCTGAAAAGAACTTAAAGGACTTGGTTGAAGTACCACCATCAGTGCTAGCCAATTTGGAGATACTGCTTGCAAAACGAATGGAGGATGTGTTAGAACAAGCTTTTGACAGTGGGTGTCCTTGGAGACAAAACTCAAAATTGTAA 2637 0.435 MADTVELPSRLAILPFKNKVLLPGAIIRIRCTSPTSVKLVEQELWQREEKGMIGILPVRDTAAASETPTVSDSVDQTSKVHGGSSDSNTKVQNDVHWHNRGVAARALHLSRGVEKPSGRVTYIVVLEGLCRFNVQELSTRGTYHTAKISSLEMTKTEMEQVEHDPDFIMLSRQFKATAMELISVLEQKQSTGGRTKVLLETVPVHKLADIFVASFEISFEEQLSMLDSVDAKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMKAIKEELGDNDDEEDDLAALERKMQSAGMPQNTWKLAIREFRRLKKMQPQQPGYSSSRAYLELLSDLPWQKASKEHELDLRAAQERLDNDHYGLVKVKQRIIEYLAVRKLKPDARGPVLCFVGPPGVGKTSLASSIAAALDRKFVRISLGGVKDEADIRGHRRTYIGSMPGRLIDGLKKVAVCNPVMLLDEIDKTGSDVRGDPASALLEVLDPEQNKTFNDHYLNVPFDLSKVIFVATANRAQPIPPPLLDRMEVIELPGYTPEEKLKIAMRHLIPRVLDQHGLSSEFLQIPKAMVQLVIQRYTREAGVRSLERNLAALARAAAVRVAEQEQVVPLSKGVEGLSTPLLENRLVDSAEVEMEVIPMGVNNRDISNTFRITSPLVVDETMVEKVLGPPKFDGRETAERVVTPGICVGLVWTTFGGEVQFVEASTMVGKGELHLTGQLGDVIKESAQIALTWVRARAADLKLTSAEGINLLEGRDIHIHFPAGAIPKDGPSAGVTLVTALVSLFSKRKVRSDTAMTGEMTLRGLVLPVGGIKDKILAAHRYGIKRVILPEKNLKDLVEVPPSVLANLEILLAKRMEDVLEQAFDSGCPWRQNSKL* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5584 878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 343 609 IPR027417 -
Tpr2g5584 878 Hamap Lon protease homolog 2, peroxisomal [LONP2]. 3 878 IPR027501 GO:0004252|GO:0006515
Tpr2g5584 878 Coils Coil 279 299 - -
Tpr2g5584 878 MobiDBLite consensus disorder prediction 64 88 - -
Tpr2g5584 878 Gene3D - 163 287 - -
Tpr2g5584 878 PANTHER ATP DEPENDENT LON PROTEASE FAMILY MEMBER 1 878 IPR027065 GO:0004176|GO:0004252|GO:0005524|GO:0030163
Tpr2g5584 878 ProSiteProfiles Lon N-terminal domain profile. 11 244 IPR003111 -
Tpr2g5584 878 Gene3D - 356 534 IPR027417 -
Tpr2g5584 878 ProSitePatterns ATP-dependent serine proteases, lon family, serine active site. 771 779 IPR008268 GO:0004176|GO:0004252|GO:0006508
Tpr2g5584 878 Gene3D - 685 870 IPR014721 -
Tpr2g5584 878 Pfam ATP-dependent protease La (LON) substrate-binding domain 11 244 IPR003111 -
Tpr2g5584 878 ProSiteProfiles Lon proteolytic domain profile. 683 868 IPR008269 GO:0004176|GO:0004252|GO:0006508
Tpr2g5584 878 PANTHER LON PROTEASE HOMOLOG 2, PEROXISOMAL 1 878 - -
Tpr2g5584 878 Pfam Lon protease (S16) C-terminal proteolytic domain 660 866 IPR008269 GO:0004176|GO:0004252|GO:0006508
Tpr2g5584 878 SUPERFAMILY PUA domain-like 10 243 IPR015947 -
Tpr2g5584 878 TIGRFAM lon: endopeptidase La 13 866 IPR004815 GO:0004176|GO:0005524|GO:0006508
Tpr2g5584 878 SUPERFAMILY Ribosomal protein S5 domain 2-like 686 866 IPR020568 -
Tpr2g5584 878 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 399 418 - -
Tpr2g5584 878 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 686 702 - -
Tpr2g5584 878 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 768 787 - -
Tpr2g5584 878 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 798 817 - -
Tpr2g5584 878 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 821 839 - -
Tpr2g5584 878 CDD AAA 376 537 - -
Tpr2g5584 878 Gene3D - 2 152 IPR046336 -
Tpr2g5584 878 SMART lon_5 10 244 IPR003111 -
Tpr2g5584 878 Gene3D - 295 343 - -
Tpr2g5584 878 Gene3D - 535 674 - -
Tpr2g5584 878 PIRSF Lon_proteas 1 622 IPR004815 GO:0004176|GO:0005524|GO:0006508
Tpr2g5584 878 PIRSF Lon_proteas 639 869 IPR004815 GO:0004176|GO:0005524|GO:0006508
Tpr2g5584 878 SMART AAA_5 391 536 IPR003593 -
Tpr2g5584 878 Pfam ATPase family associated with various cellular activities (AAA) 395 532 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5584 Tpr-Chr2 64648273 64658970 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5584 K01338 - gmx:100796650 1517.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5584 2 64648273 64658970 Tpr2g5584 2 64648273 64658970 ECH