Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5563 ATGCAACAAGTTCATTCGAGTTTTTCAATTTCAAACCAAAGAATTATACAAAATCATAGTATCGTTTCACAAATTGAAGTAGAAAATTTGCATCCACTACCATCATCATCATCATCAATGGTTCTTCAATTTCACGAACACATAATCACAGAGCTTCTAGAAGATACCAATGGCGGTCTCGTTATTCTCTCTTCAGGTCTCTCTCTATCCAAACTCATATCATCTCTTCTCCTTCTCCATTCATCTTCACAAGGAACACTCCTCATTCTATCTCCTCCTTCCTCCACTCTCAAATCCAAAATCAATTTCCATCTCAAAACCCTAAACCCCCAATTCTATCAAATCCCCGCCGAAATCACCGCCGATCTCCCCATTCACCACCGTCACTCTCTCTACACATCCGGTTCCGTCTTTTTCATCACTCCTCGAATCCTAATCGTTGATCTTCTCACGAAAAAACTACCTACATCAACGATTTCCGGACTTATTATTCTCAACGCTCATTCGATTTCTGAAACTTCTACTGAAGCTTTTATTGTTAGGATTTTCCGTTCCGTTAACCGTGATGCATTTATTCGTGTTTTCTCCGATAGGCCGCAGGCGATGGTTTCTGGTTTCGCGAAGGCGGAGAGGACTTTGAAGTGTTTGCATATAAGGAAGATGCATTTATGGCCGAGGTTTCAGGTTTATGTTTCGCAGGAGCTTGAGAGGGATCCACCGGATGTTGTGGATATTAGGGTTCCGATGAGTAAGTATATGGTGGGGATTCAGAAGGCTATTATTGAGGTTATGGATGCGTGTTTGAAGGAGATGAGAAAGACAAATAAGGTTGATGTCGAGGATTTGACGGTGGAGAATGGGTTGTTTAAGTCTTTTGATGAGATTGTGAGGAGACAGTTGGATCCAATTTGGCATACCTTGGGGAAGAAGACTAAGCAGCTTGTTTCTGATCTTAAGACGTTGAGGAAGTTGTTGGATTATCTAGTCAGGTATGATGCGGTGACATACTTGAAATATTTGGATACACTTAGAGTGTCAGAGAGTTTTCGATCTGTTTGGATATTTGCAGAGGCGAGCTATAAGATATTTGACTATGCAAAGAAACGTGTTTATCATCTTGTGAGGTCAGATGGTGTGAAATTGAACGAGTCTAGTAAGGGTGTCAAAAACAAAAAAAAAAAAGTCAAGGGGGATAACAAAGAAACTGAAGAAGCTGATGTTGATTCCTCAACCAGTTCAAATCATGGCATAGTTTTGGAGGAAGTCTTGGAAGAAGCACCAAAGTGGAAGGTCTTACGTGATATTCTTGAAGAGGTAGAGGAGGAACGGCAAAAGCAAGGCATGTTGAGGGAAGAAGTGTTGGCTGAAGGCGAAGACACCGACAATGGCATTGTATTAGTGGCATGTAAAGATGAAAGGTCGTGCTTGCAGCTTGAAGAATGCATCACCAACAGTCCGAAAAAGGTCATGAGAGACGAATGGAAGAAGTACTTACTAAACAAGGTACAATTACGTGATGTAGTGCATAAGAAAAAGAAGCCAACGGATCCTAAAGGTTTTGGGATACTTGATGGAGTCACTCCCATATCTCCCGCAAAGAATTCTGAAACCAGCGGCATTAATAAGCAGGAGCATGATGCACTTCTTGCAGCAGCTTCAAAACTGCGAAATCTTGCTGAAAATAATCATGTTGTCGAAGATGCTCCTCAGTCTGATTTGGGTGGACATGTTCGAAAAGGAAAGAGAAAATTGGGAAATAGAAATGCCCCAATCGTTATTGATGGCTCAGGTGTTCAGAGTAAGAATAAGGAGGAAGTGGCAAGTGGTAAAACTGGGACGTCAGATTCAAAAAATAAAGCCCATATGGGTGAAACTAGTCCTGTCATTGCTGGCAGATTTTGTGAAACCAAACATGGGGGGATATCTGTAGAAGACACGGTTCTTCGGAGGCATAGCTGTCCTGATGCAGTGGGAAGAGATGGGAAGTCACTACCGCCAGTACATTTTTATGCCCTAGAAAGTGATCAGCCTATACTGGACATATTAAAGCCCTCTGTAATCATTGTTTACCATCCAGACATGACCTTTGTAAGAGAAATTGAAGTATACAAAGCTGAGAATCCCTCAAAAAGGTTGAAGGTTTATTTTATTTTCTATGAAGATTCAACTGAGGTTCAGAAGTTCGAGGCAAGTATACGTAGAGAGAATGGAGCATTTGAATCTTTGATCAGGCAAAAATCTATGATGACGATTCCAGTTGACCGGAGTGGGCATGGTTTAGGATTGAATTCTACCCTAGATTCAGATTTAAATACTACCCAGAACTCAATAACCAGAAAAGCAGGTGGGAGAAAGGGGGTTGATAAGGAAATGCAGGTCATTGTGGACATGAGGGAATTCATGAGCAGCCTTCCAAATATTCTTCATCAAAAGGGAATGCGCATAATTCCTGTGACCCTTGAAGTTGGTGACTATATCCTATCACCATTAATTTGTGTGGAAAGAAAAAGTATTCAAGATCTCTTCCAGAGTTTCACATCAGGTCGTCTATACACCCAGGTGGAAACAATGGCGCGATATTATAAGATACCTGTGCTCTTGATTGAGTTTTCACAGGATAAGAGCTTCTCATTTCAGTCTGCTGGTGATATTGGTGATGATGTGACACCCAATAGCATTATATCAAAGTTGTCGTTGCTTGCTCTACATTTTCCCCGACTACGAATAATCTGGTCTCGAAGTTTGCATGCTACTTCTGAAATATTTGCTTCACTGAAGGCAAATCAAGATGAACCAGATGAAACAAAAGCAATGAGAGTGGGTGTTCCATCAGAAGAAGGAATTGTGGAAAATGACGTGAGGGCGGAAAATTACAATACATCGGCTGTGGAGTTTCTAAGACGACTTCCAGGTGTTACAGATTCTAATTATAGAGCCATAATGGATGGGTGTAAGAGTTTGGAAGAACTTGCTCTTCTTCCGGTGGAAAAGCTAGCTGAAATAATGGGTGGTCATAAAGCTGCTCGTACCCTTAGAGACTTTTTAGATGCTAAATATCCCACTTTGTTGTGA 3072 0.4121 MQQVHSSFSISNQRIIQNHSIVSQIEVENLHPLPSSSSSMVLQFHEHIITELLEDTNGGLVILSSGLSLSKLISSLLLLHSSSQGTLLILSPPSSTLKSKINFHLKTLNPQFYQIPAEITADLPIHHRHSLYTSGSVFFITPRILIVDLLTKKLPTSTISGLIILNAHSISETSTEAFIVRIFRSVNRDAFIRVFSDRPQAMVSGFAKAERTLKCLHIRKMHLWPRFQVYVSQELERDPPDVVDIRVPMSKYMVGIQKAIIEVMDACLKEMRKTNKVDVEDLTVENGLFKSFDEIVRRQLDPIWHTLGKKTKQLVSDLKTLRKLLDYLVRYDAVTYLKYLDTLRVSESFRSVWIFAEASYKIFDYAKKRVYHLVRSDGVKLNESSKGVKNKKKKVKGDNKETEEADVDSSTSSNHGIVLEEVLEEAPKWKVLRDILEEVEEERQKQGMLREEVLAEGEDTDNGIVLVACKDERSCLQLEECITNSPKKVMRDEWKKYLLNKVQLRDVVHKKKKPTDPKGFGILDGVTPISPAKNSETSGINKQEHDALLAAASKLRNLAENNHVVEDAPQSDLGGHVRKGKRKLGNRNAPIVIDGSGVQSKNKEEVASGKTGTSDSKNKAHMGETSPVIAGRFCETKHGGISVEDTVLRRHSCPDAVGRDGKSLPPVHFYALESDQPILDILKPSVIIVYHPDMTFVREIEVYKAENPSKRLKVYFIFYEDSTEVQKFEASIRRENGAFESLIRQKSMMTIPVDRSGHGLGLNSTLDSDLNTTQNSITRKAGGRKGVDKEMQVIVDMREFMSSLPNILHQKGMRIIPVTLEVGDYILSPLICVERKSIQDLFQSFTSGRLYTQVETMARYYKIPVLLIEFSQDKSFSFQSAGDIGDDVTPNSIISKLSLLALHFPRLRIIWSRSLHATSEIFASLKANQDEPDETKAMRVGVPSEEGIVENDVRAENYNTSAVEFLRRLPGVTDSNYRAIMDGCKSLEELALLPVEKLAEIMGGHKAARTLRDFLDAKYPTLL* 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5563 1023 SUPERFAMILY Restriction endonuclease-like 789 927 IPR011335 -
Tpr2g5563 1023 SMART ERCC4_2 792 872 IPR006166 GO:0003677|GO:0004518
Tpr2g5563 1023 MobiDBLite consensus disorder prediction 388 410 - -
Tpr2g5563 1023 Gene3D - 950 1021 - -
Tpr2g5563 1023 MobiDBLite consensus disorder prediction 593 621 - -
Tpr2g5563 1023 Pfam ERCC4 domain 795 924 IPR006166 GO:0003677|GO:0004518
Tpr2g5563 1023 PANTHER DNA REPAIR ENDONUCLEASE XPF 39 1019 - -
Tpr2g5563 1023 Gene3D - 792 938 - -
Tpr2g5563 1023 Coils Coil 432 456 - -
Tpr2g5563 1023 MobiDBLite consensus disorder prediction 601 621 - -
Tpr2g5563 1023 MobiDBLite consensus disorder prediction 388 408 - -
Tpr2g5563 1023 SUPERFAMILY RuvA domain 2-like 954 1018 IPR010994 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5563 K10848 - gmx:100812359 1619.75