Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5552 ATGGATCATGTTGTTGGCTCCCAAAACCATAGCTCACAAATGGTAGCTGTGACAATCGTGTCGCCAGCTAAATTAACCGAACCACAACAAATTTGTCAAATTCTATTCAATGATGAAACAGATAACAAAAAGATCAATGCAATAAGGAAAATTGAAGGATGCTATCAAATAGTGTTGTACTATGAAAATGTTCAAGATGAGGATCATGATTGGTCTTTAACTGGTTGGATTGTTGAGTCACTAGCTAGGGCCTTGTTGGATCATCCTCTACTAGCTGGTAGACTCCAAAAAAAGGACTTAACTGGATTTGAAATTGTGTCTAATGATTCTGGAATAAAACTCTTGGAGGCTAACTATCCTACAACCTTGTCTGAGTTTCTTGAGTTGAATGAAAAGGAATGTGATGATGATCATGAGGCTGAGCTTGTTTTTTGGAATGGAATTGATGGTCAATTTCCTCAGTTCTCTCCCCTCTTTTTTGTTCAGGTGACCAACTTCAAATGTGGAGGATTCTCAATTGGCATAAGTTGTAACCTCCTCTTGGCAGATATTTTGGTAGTTCAAAAAATCCTTAATAAATGGGCACAAATACACAACATGTTACCCTCAAATGAAGAAACTGGCGCAACCATATTTAACCACCCTCGTCTAAAAAATCCGAAATCTCTCCCATCAGAGGACTTAATCAACCACACTCAAAACAAAAACAGAATTCAAAGTGTAGTATTCAAAGTCACTACTAAGGATGCAACTTTCAGCAAGGAATTGTGGAAGGAATTAGCCATGTTTTGCATTGATGAAATGGAACAAAAACTAGACATGAAAATAGGTTCAAGTTTTACTTTGGTTGTTAAAGAATCTTTTGAGGTCATTGAGGTAGAAAGTTTGACAAAGAGTGGATATAGTACTATGAAGGAAATCCTTAAGGATCAAATATTTTGCATTACATCATGGAATGATTTTGGAGTGAATGAGGTGGTTTTTCATGAAGAAAATAAGCCTCTTCATCCTCTTCATGTTTCTTGTTGGGTTGGATGTGTCGCTGATACACATGTCATGATAGTTCCATGCCTAGAGGAGAATGCTTATGCTGTGATTATAGTTTCACCCTGTTAA 1116 0.3692 MDHVVGSQNHSSQMVAVTIVSPAKLTEPQQICQILFNDETDNKKINAIRKIEGCYQIVLYYENVQDEDHDWSLTGWIVESLARALLDHPLLAGRLQKKDLTGFEIVSNDSGIKLLEANYPTTLSEFLELNEKECDDDHEAELVFWNGIDGQFPQFSPLFFVQVTNFKCGGFSIGISCNLLLADILVVQKILNKWAQIHNMLPSNEETGATIFNHPRLKNPKSLPSEDLINHTQNKNRIQSVVFKVTTKDATFSKELWKELAMFCIDEMEQKLDMKIGSSFTLVVKESFEVIEVESLTKSGYSTMKEILKDQIFCITSWNDFGVNEVVFHEENKPLHPLHVSCWVGCVADTHVMIVPCLEENAYAVIIVSPC* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5552 371 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 361 - -
Tpr2g5552 371 Pfam Transferase family 79 253 - -
Tpr2g5552 371 Gene3D - 13 227 IPR023213 -
Tpr2g5552 371 PANTHER OS02G0653400 PROTEIN 11 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5552 Tpr-Chr2 64283483 64284951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5552 89 249 Acyl Lipid Metabolism Gene Families AT3G23840 25.882 2.44e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5552 - - mtr:MTR_5g013270 548.895