Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5551 ATGATGCAATTCAGCACCACCGCACCAGCTCATAATCTTCACAAATTTCAAGCACTAAGATGCCCCAGTTTCAGATGCCACTCTTCATCCATCAAACAACAACCTATTTCATCTTTTGCTTCTTCTTCTTCTTCTACTCAAACTCATAAACCATCTCGTTTACATCTTTCCAACCTTGACAAGTTTCTTGATAGCCAAAAACCATTAGAAACATCATCAACCACAACCCACTTTCAACACCAACAAATACAACAACCGATTCAAAAGAGTGATGCAAAGGACAAAAAAGGTAAAAACTTTCTTGAAGGTCTTAACTTAGCAAAACTATGGCCAGAAATCAAACCAGGAGATGAAATTTCTCCACGCCACCTCAAACGTCTTCAGCGTCTTCTTTCCAAGACGGCGGAGTATTCACCCAGAAACATCCTCGGCGGTAAGTGGAAGGAATATCACGGCAGTAATGACTGGAAAGGGATGTTAGATCCTCTTGATGATAATCTCCGGCGAGAAGTTGTTCGTTATGGGGACTTGGTCCAAGCTGCTTATCAAGCTTTTCATGCTGATCCTGCCATGTCATCAACTGAACCACCACAACACCGCCACGTGTCTTTGCCGGAAAGATCTTATAAAGTTACCAAGAGTTTATATGCCACATCATCGATCGGTTTACCTAAATGGATCGATGAGGTGGCTCCTGATCTTGGTTGGATGACCCAGCGTTCCAGCTGGGTCGGGTACGTCGCAGTCTGCGACGACAGAAGAGAGATTGCGAGAATGGGTAGAAGAGACATCGTGATCTCTCTTCGTGGAACTTCAACTTGTCTTGAATGGGCCGAAAACATGAGAGCCCAATTAGTCGACTTATGCGACGATAACACTGAAGCCCAAGCCCAAGCCCAAGCCCAAACAAAGCCCAAAGTAGAGTGTGGGTTCATGAGCTTATACAAAACTAAAGGAGCCCATGTTCAAAGCCTATCTGAATCAGTTGTAGAAGAAATAAAACGTTTAATTGAACTTTACAAAGGTGAAGAATTAAGCATAACTGTTACAGGACATAGTCTTGGAGCAACACTAGCACTATTGGTAGCTGAAGAAATCAGCACGTGTGACACAAACGTGCCACCAGTGGCTGTTTTTTCATTTGGTGGACCTCGTGTAGGTAACAAAGCCTTTGGTGAACATCTTGAAAAGAAAAACGTGAAAGTGCTTAGAGTTGTGAACACACAAGACATGATTACAAGAGTACCAGGAATTTTCCTAAGTGAAGAGCTTGAAGAAAAATTGAAGAATTCAAAATTGGTTAGTGGTGTTGTTGATATGTTAGAAGAGAACACACCTTTGGGATATTCACATGTTGGAACTGAATTAAGGGTTAATACTAAGATGTCACCTTATTTGAAGCCTGATGCTGATATTGCTTGTTGTCATGATTTGGAAGCTTATTTACATTTAGTGGATGGGTATATGGCTTCTAATTGTCCATTTAGAGCTAATGCTAAGAGAAGTTTAGCTAGATTAATGCAAGATCAAAGTGCTAATGTTAAAAAATTGTATACTAGTAAGGCTAAAGGATTGTCTGTTAATCTTAGTAGACAAGGATCATCACTACAAAATCTTAGTAGACAAGGATCTATGTCTATGTCTACTTGTTTACCTAGTCCATCATCTTCATAA 1674 0.4068 MMQFSTTAPAHNLHKFQALRCPSFRCHSSSIKQQPISSFASSSSSTQTHKPSRLHLSNLDKFLDSQKPLETSSTTTHFQHQQIQQPIQKSDAKDKKGKNFLEGLNLAKLWPEIKPGDEISPRHLKRLQRLLSKTAEYSPRNILGGKWKEYHGSNDWKGMLDPLDDNLRREVVRYGDLVQAAYQAFHADPAMSSTEPPQHRHVSLPERSYKVTKSLYATSSIGLPKWIDEVAPDLGWMTQRSSWVGYVAVCDDRREIARMGRRDIVISLRGTSTCLEWAENMRAQLVDLCDDNTEAQAQAQAQTKPKVECGFMSLYKTKGAHVQSLSESVVEEIKRLIELYKGEELSITVTGHSLGATLALLVAEEISTCDTNVPPVAVFSFGGPRVGNKAFGEHLEKKNVKVLRVVNTQDMITRVPGIFLSEELEEKLKNSKLVSGVVDMLEENTPLGYSHVGTELRVNTKMSPYLKPDADIACCHDLEAYLHLVDGYMASNCPFRANAKRSLARLMQDQSANVKKLYTSKAKGLSVNLSRQGSSLQNLSRQGSMSMSTCLPSPSSS* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5551 557 PANTHER GLYCEROLIPASE A1 2 531 - -
Tpr2g5551 557 Coils Coil 278 298 - -
Tpr2g5551 557 MobiDBLite consensus disorder prediction 536 557 - -
Tpr2g5551 557 MobiDBLite consensus disorder prediction 37 56 - -
Tpr2g5551 557 CDD Lipase_3 200 486 - -
Tpr2g5551 557 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 2 531 - -
Tpr2g5551 557 MobiDBLite consensus disorder prediction 37 53 - -
Tpr2g5551 557 MobiDBLite consensus disorder prediction 70 88 - -
Tpr2g5551 557 MobiDBLite consensus disorder prediction 70 93 - -
Tpr2g5551 557 SUPERFAMILY alpha/beta-Hydrolases 238 488 IPR029058 -
Tpr2g5551 557 Gene3D alpha/beta hydrolase 146 536 IPR029058 -
Tpr2g5551 557 Pfam Lipase (class 3) 265 418 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5551 Tpr-Chr2 64278519 64280436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5551 24 557 Acyl Lipid Metabolism Gene Families AT4G16820 54.376 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5551 - - gmx:100806573 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5551 2 64278519 64280436 Tpr1g0517 1 4367688 4373292 PCT