Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5430 ATGGCTAATAATGCTGCTGCGTGTGCTGAGAGAGCAACTAGTGACTTGCTCATTGGACCAGATTGGGCAATCAACATAGAATTGTGTGATATAATTAACTTGGACCCGAGGCAAGCAAAGGATGCATTGAAGATACTTAAGAAGCGTTTGGGCAGTAAAAATCCCAAAACACAGCTGCTGGCTCTTTTTGTACTGGAGACCCTTAGTAAAAACTGTGGTGAAAGTGTATTTCAGCAGATCATTGAGCGTGATATATTGCATGAAATGGTTAAGATAGTGAAGAAGAAGCCTGACTTAAGTGTGAGGGAAAAGATACTGATTTTAATTGATGCATGGCAAGAAGCTTTTGGAGGCCCAAGTGGAGTTTTCCCCCAATACTATGCAGCATATAATGAACTAAAGTCTGCTGGAGTTGAATTTCCACCAAGAGAAGAAAATAGTGTACCATTCTTCACACCTCCTCAAACTCAGCCAATTGTTCATTCTGCTGTAGAATTTGATGATGCTGCTATTCAGGCTTCTCTTCAGTCAGATGCATCTGACCTTAGTGTACTAGAGATTAAAAATGCTCAAGGGTTAGCCGATGTTTTGACAGAAATGCTCAGTGCCTTGAATCCGAAAGACCCCGAGGGCGTGAAGGAGGAAGTGATTGTTGATCTTGTTGACCAGTGCCGTTCTTACCAGAAACGTGTCATGCTTCTTGTGAACAATACTGTGGACGAGGACCTTTTAGGTCAGGGACTGGCATTGAATGACAGCCTTCAGCGAGTACTCCGTCAACACGACGATATTGCGAAAGGAACTGCTAATTCAGGTGCAAGAGAAGTAGAAACTCCAGTTCTGCCGCTTGTTAATGTAAACCATGAAGATGATGACTCGGACGATGATTTTGGTCAATTAGCCCATAGGTCATCTCGAGATGCTCATGCACAGAATCGGAAACCAGAGCCAGTGAGGGTAAACTCATTTATTCCTCCCCCACCAGCATCAAAGAAGCCAGTCTACTCTGGCACTGGCGTGGTTGACTATCTTAGTGGTGATGCATACAAGGCAGAAGGATCCTTTGGAAACTCAGAACCAACTTCATATGCAGCTCCTATTCATTCTAGCCCTAATCCGGCCCCATCAACTATTCCAACAGAGTCCTCAACCTATCCTCATGCCACTACCACCCCATCACCAGTTTTTGACAAGCAGCCTATATATGATGAGCCATCTCCCATGAAGTCTTCAGAACAGCTGCCTCCAGCTCCTTGGGATACACAAGCTCCTGTTGTTATTCCACCCCCCCCTTCAAAGTATAATCAGAGACAGCAGTTTTTTGACCAAAAAGTTTCATCGCATTCAAGTAATGGGTCGAGTTCGTCTTCTGACAGCTTGGTGGGACAAACTCAAAATCTCTCTCTGAATTCATCCACCCCAACCAAAGAACAGAAACCAGAAGATGCCCTTTTCAAAGATCTGGTCGATTTTGCAAAATCGAAAACCTCTTCATCTTCCAAACCCAATAATAGGTCGTATTGA 1524 0.4396 MANNAAACAERATSDLLIGPDWAINIELCDIINLDPRQAKDALKILKKRLGSKNPKTQLLALFVLETLSKNCGESVFQQIIERDILHEMVKIVKKKPDLSVREKILILIDAWQEAFGGPSGVFPQYYAAYNELKSAGVEFPPREENSVPFFTPPQTQPIVHSAVEFDDAAIQASLQSDASDLSVLEIKNAQGLADVLTEMLSALNPKDPEGVKEEVIVDLVDQCRSYQKRVMLLVNNTVDEDLLGQGLALNDSLQRVLRQHDDIAKGTANSGAREVETPVLPLVNVNHEDDDSDDDFGQLAHRSSRDAHAQNRKPEPVRVNSFIPPPPASKKPVYSGTGVVDYLSGDAYKAEGSFGNSEPTSYAAPIHSSPNPAPSTIPTESSTYPHATTTPSPVFDKQPIYDEPSPMKSSEQLPPAPWDTQAPVVIPPPPSKYNQRQQFFDQKVSSHSSNGSSSSSDSLVGQTQNLSLNSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNNRSY* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5430 507 PIRSF TOM1 1 507 IPR014645 -
Tpr2g5430 507 PANTHER TOM1-LIKE PROTEIN 4 1 506 - -
Tpr2g5430 507 SUPERFAMILY ENTH/VHS domain 4 142 IPR008942 -
Tpr2g5430 507 MobiDBLite consensus disorder prediction 303 335 - -
Tpr2g5430 507 CDD VHS 10 135 - -
Tpr2g5430 507 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Tpr2g5430 507 ProSiteProfiles GAT domain profile. 177 266 IPR004152 GO:0035091|GO:0043130
Tpr2g5430 507 Gene3D - 2 158 IPR008942 -
Tpr2g5430 507 SUPERFAMILY GAT-like domain 145 267 - -
Tpr2g5430 507 MobiDBLite consensus disorder prediction 360 396 - -
Tpr2g5430 507 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Tpr2g5430 507 Gene3D - 175 273 IPR038425 -
Tpr2g5430 507 Pfam VHS domain 9 118 IPR002014 GO:0035091|GO:0043130
Tpr2g5430 507 MobiDBLite consensus disorder prediction 360 484 - -
Tpr2g5430 507 CDD GAT_GGA_like_plant 186 264 - -
Tpr2g5430 507 Pfam GAT domain 193 267 IPR004152 GO:0035091|GO:0043130
Tpr2g5430 507 MobiDBLite consensus disorder prediction 432 478 - -
Tpr2g5430 507 PANTHER TOM1-LIKE PROTEIN 1 506 IPR044836 GO:0035091|GO:0043130|GO:0043328
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5430 Tpr-Chr2 61215736 61222102 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5430 - - gmx:100792343 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5430 2 61215736 61222102 Tpr2g5430 2 61215736 61222102 ECH