Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5426 ATGTTGATGGCAGCTGCTTTGTTATTTAAAAGGTCTAGGAGCTTAGTTCAGAATAAGGTATCCTTGTTGTTAGGAATAGGAGGATCAAGATCAACAACAACTCCGCCACCATTGATTAACCATCATCGGTTTCGATATTCTTCTTCTCAGCCATTTGTTGCATCATCAACGCGTTATGAATCCAGCAAAGCACAGGCACAGTTGGAAGATTTTCAGCAACATGATGATCATGATGATCAGGTCATTGATTTTCCTGGAGGAAAAGTTGCATTCACTTCTGAAATGAGATTCATTTCTGATACATCTCACAAGAGGGTTCCGTGCTATCGAGTCCTTGATGACAATGGTGAACTCATGACACACACCAATCATGTTCAGGTTAGCAAAGAATTGGCTGTGAGGATGTATTCTGAGATGGTCACTCTTCAAACAATGGACAGCATATTCTATGAGGTGCAGAGGCAAGGAAGAATTTCCTTCTACCTCACCTCGATGGGAGAAGAAGCTGTTAACATTGCATCAGCAGCTGCGCTTTCTTCTGATGATATTATCTTGCCTCAGTACCGGGAGCCTGGAGTTCTGTTATGGCGTGGTTTTACGCTGCAACAAATTGCTCATCAATGCTTTGGAAACACAAATGATTTAGGTAAAGGAAGGCAAATGCCTATACACTACGGCTCTAACAAGCACAATTACTTCACAGTCTCATCTCCCATTGCAACACAACTTCCTCAAGCTGTAGGCGCTGCTTATTCGCTTAAAATGGATGGCAAAAATGCATGTGCGGTCACTTTTTGTGGGGATGGTGCTACTAGTGAGGGAGATTTTCATGCTGGTATGAATTTTGCAGCAGTAATGGAAGCACCAGTTATTTTTATCATTCGTAACAATGGATGGGCTATCAGTACCCCTGTCGAAGACCAATTTCGGAGTGATGGTATTGTGGTGAAAGGTCAAGCTTATGGCATATGGAGTATAAGAGTAGATGGAAATGATGCTCTTGCTGTTTATAGTGCAGTTCATACTGCACGCGAAATTGCTATAAAAGAACAAAGACCAGTTTTAATTGAGGCTCTCAGTTATAGAGTAGGACACCACTCTACATCCGATGATTCGACCAAGTACCGACCAATTGATGAGATTGAATATTGGAAAATGGAAAGAAGTCCTGTGAATAGATTCAAAAGATGGGTGGAAAGGAATGGTTGGTGGAGTGACAAGGATGAATTAGAGCTTAGAAGCAGTGTCAGGAAGCAGTTAATGCATGCGATTCAAGTGGCTGAGAAAGCACAAAAACCTCCACTTGAGGACTTATTTACTGATGTATATGACCAACTTTCATCAAACCTTGAGGAGCAAGAAAAACTACTTAGAAAAGCCATTGAGAAGCATCCCAAAGATTACCCTTCTGATGTTCCTTTGTAG 1425 0.4154 MLMAAALLFKRSRSLVQNKVSLLLGIGGSRSTTTPPPLINHHRFRYSSSQPFVASSTRYESSKAQAQLEDFQQHDDHDDQVIDFPGGKVAFTSEMRFISDTSHKRVPCYRVLDDNGELMTHTNHVQVSKELAVRMYSEMVTLQTMDSIFYEVQRQGRISFYLTSMGEEAVNIASAAALSSDDIILPQYREPGVLLWRGFTLQQIAHQCFGNTNDLGKGRQMPIHYGSNKHNYFTVSSPIATQLPQAVGAAYSLKMDGKNACAVTFCGDGATSEGDFHAGMNFAAVMEAPVIFIIRNNGWAISTPVEDQFRSDGIVVKGQAYGIWSIRVDGNDALAVYSAVHTAREIAIKEQRPVLIEALSYRVGHHSTSDDSTKYRPIDEIEYWKMERSPVNRFKRWVERNGWWSDKDELELRSSVRKQLMHAIQVAEKAQKPPLEDLFTDVYDQLSSNLEEQEKLLRKAIEKHPKDYPSDVPL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5426 474 Coils Coil 443 463 - -
Tpr2g5426 474 Gene3D - 77 472 - -
Tpr2g5426 474 CDD TPP_E1_PDC_ADC_BCADC 135 427 - -
Tpr2g5426 474 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 106 469 IPR029061 -
Tpr2g5426 474 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 53 474 - -
Tpr2g5426 474 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 1, MITOCHONDRIAL-LIKE 53 474 - -
Tpr2g5426 474 Pfam Dehydrogenase E1 component 138 434 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5426 Tpr-Chr2 61168652 61175183 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5426 1 311 Acyl Lipid Metabolism Gene Families AT1G21400 61.562 1.03e-137 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5426 K00166 - gmx:100796766 742.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5426 2 61168652 61175183 Tpr2g5426 2 61168652 61175183 ECH