Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5420 ATGCAAAATCAAACCATGGAAATTGAACTGCCTGTTGTGATTGTTGGTGCTGGTCCTGCTGGCCTAGCAACCTCAGCATGTCTTAACAAATTTTCAATTCCAAACATCATCTTAGAAAAAGATGATTGTCATGCATCTCTTTGGAGAAAAAGAGCTTATGATCGTTTAAAACTTCACTTGGCTAAAGAATTTTGTAACCTACCTCACATGCCTTTCTCATCTGATTTACCAAAATTTGTTCCTAGGGTTGATTTTCTCCGTTATTTGGACGAGTATGTGATTAATTTTAATATCGCTATCCGGTACAATCGTTATGTCAACAATGCATCTTTTGATGTTAATTGTGGGAAATGGAGGGTCACCGTGACCGATAATACATCAAATGCTGACGAGACTTATCTTGCTGATCATCTTGTGGTTGCAACTGGAGAAAACTGCGATGCTTATATTCCCATGATAAATGGGCTTGAAAACTTTGAAGGTGAATACCTTCATTGTAACAAATACTTGAATGGAAGACCATGGTATGATAAGAATGTGTTGGTTGTTGGAAGTGGAAATTCTGGCATGGAGATTGCTTATGATCTCTTCACTTGGGGTGCAAATACCTCGATGGTTATAAGAAGTCCTGTACATTATTTTACAAAAGAAATGGTGTATGTGGGAATGTCTTTGGTGAAATACATAAGTATTGATAAGGTGGACAAGCTGCTGCTGATTATGAGCAAACTGATGTATGGAGATTTGTCCAAGTATGGCTTGGTAAGACCAAAGGAAGGACCCTTTGCCCGGAAATTCAGTGGTGCAGGTCGTTCACCTACCATTGATGTTGGTTGCATCAAATGGATCAAGAAAGGCAAAGTAAAGGTATACCCCGGTATTGCAAGCATAAAAAAGGGCAAGATAGTTGAGTTTGAGGATGGAAGAAGTGGTGAATTTGATGTCATAATCTTTGCTACTGGATACAGAACCAATGTGCAAAAGTGGCTTAAGGATTACAAAGAGCTGTTCAATGAGGATGGATTCCCAAAACAATGTTTTCCAAATCACTGGAAAGGAAGAAATAAAATTTATTGTGCTGGATTCTCAAAAAATGGATTACAAGGCATTGCTTATGATGCTCAGAAAATAGCAGCTGATATCAACTTTGCTATTAACGGAAGGAAGCCGCGTGCAGCTGCCGAGGCTACCGATGCTCAAATCAAGTTATTAGATGAATGA 1221 0.3882 MQNQTMEIELPVVIVGAGPAGLATSACLNKFSIPNIILEKDDCHASLWRKRAYDRLKLHLAKEFCNLPHMPFSSDLPKFVPRVDFLRYLDEYVINFNIAIRYNRYVNNASFDVNCGKWRVTVTDNTSNADETYLADHLVVATGENCDAYIPMINGLENFEGEYLHCNKYLNGRPWYDKNVLVVGSGNSGMEIAYDLFTWGANTSMVIRSPVHYFTKEMVYVGMSLVKYISIDKVDKLLLIMSKLMYGDLSKYGLVRPKEGPFARKFSGAGRSPTIDVGCIKWIKKGKVKVYPGIASIKKGKIVEFEDGRSGEFDVIIFATGYRTNVQKWLKDYKELFNEDGFPKQCFPNHWKGRNKIYCAGFSKNGLQGIAYDAQKIAADINFAINGRKPRAAAEATDAQIKLLDE* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5420 406 PRINTS FAD-dependent pyridine nucleotide reductase signature 12 31 - -
Tpr2g5420 406 PRINTS FAD-dependent pyridine nucleotide reductase signature 179 197 - -
Tpr2g5420 406 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED 10 388 - -
Tpr2g5420 406 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 10 388 - -
Tpr2g5420 406 Gene3D - 1 387 IPR036188 -
Tpr2g5420 406 SUPERFAMILY FAD/NAD(P)-binding domain 177 358 IPR036188 -
Tpr2g5420 406 SUPERFAMILY FAD/NAD(P)-binding domain 12 219 IPR036188 -
Tpr2g5420 406 Pfam Pyridine nucleotide-disulphide oxidoreductase 13 211 - -
Tpr2g5420 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 11 33 - -
Tpr2g5420 406 PRINTS Pyridine nucleotide disulphide reductase class-II signature 175 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5420 Tpr-Chr2 61084094 61086910 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5420 K11816 - gmx:100818396 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5420 2 61084094 61086910 Tpr2g5420 2 61084094 61086910 ECH