Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5417 ATGTCTAAGGGAAGAGGCAGTGCATCAATGAACATGGTCATTGTGATTTCAATGATATGCATTTTTGTTATAGCTAAAAATACTAATGCAGAAACTCACAAAGTTGGAGGACCTAAGGGATGGACCTTCGGCATTGTGAGTTGGCCCAATGGTAAAACGTTTAAAGCTGGCGATGTACTCGTTTTCAACTACAATGCAAAGCTACACAATTTGGTTGCCGTGGACGAAAATGGATACAAACGGTGCAAGACCCCGGCAGGTGCTCAAGTGTTGCGAACAGGAAATGACGAAATCGAGCTAGCTAGCGGGGCAAACTATTTCATATGCAACGTTCCTGGTCACTGCCAAACTGGGATGAAGATTTCTATCAATGTAGATTAG 381 0.4304 MSKGRGSASMNMVIVISMICIFVIAKNTNAETHKVGGPKGWTFGIVSWPNGKTFKAGDVLVFNYNAKLHNLVAVDENGYKRCKTPAGAQVLRTGNDEIELASGANYFICNVPGHCQTGMKISINVD* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5417 126 ProSitePatterns Type-1 copper (blue) proteins signature. 103 119 IPR028871 -
Tpr2g5417 126 ProSiteProfiles Phytocyanin domain profile. 31 126 IPR003245 GO:0009055
Tpr2g5417 126 PANTHER BASIC BLUE-LIKE PROTEIN 9 124 - -
Tpr2g5417 126 Pfam Plastocyanin-like domain 45 119 IPR003245 GO:0009055
Tpr2g5417 126 CDD Plantacyanin 32 125 IPR041844 -
Tpr2g5417 126 Gene3D - 29 126 IPR008972 -
Tpr2g5417 126 SUPERFAMILY Cupredoxins 32 125 IPR008972 -
Tpr2g5417 126 PANTHER BLUE COPPER PROTEIN 9 124 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5417 Tpr-Chr2 61023244 61025349 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5417 8 125 Miscellaneous Gene Families AT2G32300 40.496 1.25e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5417 - - gmx:100788635 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5417 2 61023244 61025349 Tpr2g5417 2 61023244 61025349 ECH