Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5410 ATGGCCCTTGAGAATTGTTTAAGAGTATCCACACCAAGACCTCATTGTCTTCCTCCATTGTTTTCAACTTCAAGGGAAAAGCTTGTTTTCTCAGCTCAAAAACTAGGATTCAAGAAATCTGTGCTCAACTCAACACTATCACTTCCATCTGGTGTTGCCAACAGAAAATCACGATTTATTTGCAATGCTCGTGAAGCTGTAAATGAAGCTCAAGTAGTGGGTGACTCAAACTGGGATGAGCTTGTCCTTGGAAGTAAAATCCCTGTGCTGGTAGATTTTTGGGCACCATGGTGTGGTCCATGCAGGATTATAGCACCTATTATTGATGAGTTAGCCAAAGATTATGCTGGAAAAATTGCATGCTACAAGCTCAACACAGATGAATCTCCAAACACAGCAACAAAGTATGGCATCAGAAGCATTCCAACTGTTCTATTCTTCAAGAATGGAGATAAACTAGAAAGTGTGATTGGTGCAGTTGACAAGTCTACTCTTATATCAAAAGTGGAAAAATATATTGCATGA 525 0.3962 MALENCLRVSTPRPHCLPPLFSTSREKLVFSAQKLGFKKSVLNSTLSLPSGVANRKSRFICNAREAVNEAQVVGDSNWDELVLGSKIPVLVDFWAPWCGPCRIIAPIIDELAKDYAGKIACYKLNTDESPNTATKYGIRSIPTVLFFKNGDKLESVIGAVDKSTLISKVEKYIA* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5410 174 PRINTS Thioredoxin family signature 89 97 - -
Tpr2g5410 174 PRINTS Thioredoxin family signature 97 106 - -
Tpr2g5410 174 PRINTS Thioredoxin family signature 137 148 - -
Tpr2g5410 174 PANTHER GEO12009P1 50 173 - -
Tpr2g5410 174 SUPERFAMILY Thioredoxin-like 59 173 IPR036249 -
Tpr2g5410 174 TIGRFAM thioredoxin: thioredoxin 75 172 IPR005746 GO:0015035
Tpr2g5410 174 ProSitePatterns Thioredoxin family active site. 90 108 IPR017937 -
Tpr2g5410 174 CDD TRX_family 76 170 - -
Tpr2g5410 174 PANTHER THIOREDOXIN M-TYPE PROTEIN 50 173 - -
Tpr2g5410 174 Gene3D Glutaredoxin 71 174 - -
Tpr2g5410 174 ProSiteProfiles Thioredoxin domain profile. 35 174 IPR013766 -
Tpr2g5410 174 Pfam Thioredoxin 72 170 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5410 Tpr-Chr2 60941795 60943152 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5410 K03671 - gmx:100500292 256.529
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5410 2 60941795 60943152 Tpr2g5410 2 60941795 60943152 ECH