Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5407 ATGGATATAGCACATTTTTTGTTTGGAATATTTGGGAATGCTTCTGCTTTGTTCCTCTTCTTGGCACCTGTGATTACATTCAAGAGGATTATAGTGAACAAATCAACAGAGAAGTTCTCAGGCATTCCATATGTTATGACACTGCTCAATTGTCTTCTTTCTGCTTGGTATGGTTTGCCTTTTGTGTCTCCCCACAACTTACTAGTATCAACCGTAAATGGCACTGGAGCAGTGATCGAAATCATATATGTTTTGATATTCATCATATTTGCACCTAAAAAGGAAAAACTCAAAATCTTTGGTCTCTTCACTGCGGTACTTTCTGTGTTCTCTATCGTTGTTTTTGTGTCTCTCTTTGCCCTACATGGTACTCCTAGAAAGGTCTTTTGTGGTTTCGCCGCCTCCATATTTTCCGTCATCATGTATGGTTCTCCACTCTCTATTATGAGACTAGTGATCAAAACCAAGAGTGTGGAATTCATGCCATTCTTCTTGTCACTTTTTGTGTTTCTTTGCGGAACTTCTTGGTTTATCTTCGGTTTGCTAGGCCGTGATCCATTTATTGCCGTACCTAATGGTCTTGGTTCTGTTTTGGGGGCAATCCAACTAATATTGTATTTCATATACCGTAACAATAAAGGTGTTACAAAAAAACAGCCCCCAATAGATGAGGAATCGATGGAAAATGGGCAATGGAAAAACCCATCAAATGAAACAATCTAA 723 0.3873 MDIAHFLFGIFGNASALFLFLAPVITFKRIIVNKSTEKFSGIPYVMTLLNCLLSAWYGLPFVSPHNLLVSTVNGTGAVIEIIYVLIFIIFAPKKEKLKIFGLFTAVLSVFSIVVFVSLFALHGTPRKVFCGFAASIFSVIMYGSPLSIMRLVIKTKSVEFMPFFLSLFVFLCGTSWFIFGLLGRDPFIAVPNGLGSVLGAIQLILYFIYRNNKGVTKKQPPIDEESMENGQWKNPSNETI* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5407 240 Gene3D - 5 97 - -
Tpr2g5407 240 MobiDBLite consensus disorder prediction 219 240 - -
Tpr2g5407 240 Pfam Sugar efflux transporter for intercellular exchange 130 213 IPR004316 GO:0016021
Tpr2g5407 240 Pfam Sugar efflux transporter for intercellular exchange 7 94 IPR004316 GO:0016021
Tpr2g5407 240 Gene3D - 128 220 - -
Tpr2g5407 240 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 233 IPR018180 GO:0051119
Tpr2g5407 240 PANTHER RAG1-ACTIVATING PROTEIN 1 4 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5407 Tpr-Chr2 60900782 60903290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5407 1 190 Miscellaneous Gene Families AT1G21460 78.421 5.53e-108 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5407 K15382 - gmx:100785977 395.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5407 2 60900782 60903290 Tpr2g5407 2 60900782 60903290 ECH