Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5398 ATGTTGATGGCAATGTGCACCCAATTAGCAGGACCACACACGTTGACTCCACCACAATGCCGTATAAAGACCCCATCAAAAACAGTACAAAAAGTTCAAAAGACACACTCAATGGCTCCTGAAAAAAAAGAAATTTTCAAGTCATTAGAGAGTTGGGTATCACAAAATGTGTTGCCACTAGCCAAACCTGTGGAGGAATGTTGGCAGCCGCATGACTTGTTGCCAGATTCATCACTTCCGTCGGATGAGTTCATCAATCAAGTGAAGGCCTTAAGGGATCGAACAGTTGAACTTCCAGACGATTACCTCGTAGTTTTGGTCGGTGATATGATCACCGAGGAAGCATTGCCTACATACCAAACATGGATAAACAAGTTGGATGGGGTTGGGGACGAGAGTGGTTCAAGTCTCACACCATGGGTTATATGGTCACACTCTTGGACTGCTGAAGAAAATAGACATGGTGATTTACTCAAAACTTATCTCTATCTCTCTGGTCGAGTTGATATGCACATAATCGAGAAGACCATCCATTATTTGATTGGAGCTGGCCAGGATGTGGGTACTGAAAACAACCCATACATGGGCTTTGTATACACATCTTTTCAAGAGCGAGCCACATTTGTGTCACACGGCAACATGGCTCGGTTAGCTAAAAAGAGTGGTGATTTTGTACTAGCGCGCATATGTGGAACCATTGCTGCAGACGAGAAGCAACATGAGAATGCATACGTGAAAATTGTTGAGAAGCTTCTAGAAGTGGACCCAACAGAGACTATGATAGCCATATCAAATATGATGCGGCGCAAGATTACAATGCCCGCGCACTTGATGCATGATGGGCAAGACCCACACCTCTTTGATAATTTTTCTGTTGGCGCAGCTGAAACTTAG 894 0.4407 MLMAMCTQLAGPHTLTPPQCRIKTPSKTVQKVQKTHSMAPEKKEIFKSLESWVSQNVLPLAKPVEECWQPHDLLPDSSLPSDEFINQVKALRDRTVELPDDYLVVLVGDMITEEALPTYQTWINKLDGVGDESGSSLTPWVIWSHSWTAEENRHGDLLKTYLYLSGRVDMHIIEKTIHYLIGAGQDVGTENNPYMGFVYTSFQERATFVSHGNMARLAKKSGDFVLARICGTIAADEKQHENAYVKIVEKLLEVDPTETMIAISNMMRRKITMPAHLMHDGQDPHLFDNFSVGAAET* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5398 297 PIRSF Dlt9_acylACP_des 2 297 IPR005067 GO:0006631|GO:0045300
Tpr2g5398 297 Gene3D Ribonucleotide Reductase, subunit A 24 297 IPR012348 GO:0016491
Tpr2g5398 297 PANTHER STEAROYL-[ACYL-CARRIER-PROTEIN] 9-DESATURASE 6, CHLOROPLASTIC 24 293 - -
Tpr2g5398 297 Pfam Fatty acid desaturase 41 294 IPR005067 GO:0006631|GO:0045300
Tpr2g5398 297 CDD Acyl_ACP_Desat 41 295 IPR005067 GO:0006631|GO:0045300
Tpr2g5398 297 SUPERFAMILY Ferritin-like 29 296 IPR009078 -
Tpr2g5398 297 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 24 293 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5398 Tpr-Chr2 60815498 60816761 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5398 22 294 Acyl Lipid Metabolism Gene Families AT1G43800 67.518 5.01e-141 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5398 K03921 - rcu:8277360 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5398 2 60815498 60816761 Tpr2g5398 2 60815498 60816761 ECH