Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5394 ATGGATTTGATTAAAGCATCATCAAGCTTGCAACCATGGCGAATTCCTTCATCACCGCCACTTCTCACCATTTCTAGGTCTAGAAATTCTTTCTATGCCCCTCTTCGCTCTACAATCAAATTCTCTTCTCAATTTTGCACCTTTCCATATACTTCGATAAAGCCCCTTGGTATAATTCTCCATAGCAAGAAGAAAAATTCTGATTCAGAACCCATTGTAGAACCCACCATTGTCCAAGAAGTATCAGCAGATGAAGAAGAAGAAGAAGTTGATGATGATGATGAAGAATTTGAATACGAGACAGAAATTGATGAGGAATTCGAAAATGATAGTGACGCTGGCGGCGAGTATTTTGACGAGGAAGAGGGTTATGAGGAGGAGGAAGAGGATAGTGTGCCCTATGCAGGTGATGGTGGTGGAGGTGGTGGAATCGCACTCGCCGGAACATGGTGGGATAAGAAAGCATTAGCTATTGCTAAAGAGGTTACTTTGTCTTTTGATGGTGACTTGCAAATTTATGCTTTTAAAACTTTGGTTAATTCCACTATTCGAGTGCGCATTGAGAAGCTTTCCAACAAATCTGGCTCCCCCACCATGGAAGACATTGAAGCCTTTTCTAAAACATACAGAGCAAAATTGGATGAAGCGGAACTTGCCAAATTCGTTCCTGAGAATTTAAATTTGGAGGTCTCTTCTCCAGGTGTTGAAAGAATAGTTCGGATTCCAGATGATCTAGATCGATTCAAGGAGAGAGCTATGTATGTGAAATATGTCATTGATGATGATTCAAATAATCCATCTGCAGAAGGTGATGGTGTCTTCAAGCTTGAATCCTTCGACGTGGAAACAAAATATTGCACCTGGAGTTTAGCAGACGTAAGATTCAACAGAGAGAAAGCAGGGAAAGGAAGACAGTTGAATAAAAAGCAAAGAGAATGGCGTTTAAGTACTCCCTTTCATTCATTACTTTTTGTACGATTGCATTCCGATGCTTAA 996 0.4046 MDLIKASSSLQPWRIPSSPPLLTISRSRNSFYAPLRSTIKFSSQFCTFPYTSIKPLGIILHSKKKNSDSEPIVEPTIVQEVSADEEEEEVDDDDEEFEYETEIDEEFENDSDAGGEYFDEEEGYEEEEEDSVPYAGDGGGGGGIALAGTWWDKKALAIAKEVTLSFDGDLQIYAFKTLVNSTIRVRIEKLSNKSGSPTMEDIEAFSKTYRAKLDEAELAKFVPENLNLEVSSPGVERIVRIPDDLDRFKERAMYVKYVIDDDSNNPSAEGDGVFKLESFDVETKYCTWSLADVRFNREKAGKGRQLNKKQREWRLSTPFHSLLFVRLHSDA* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5394 331 SUPERFAMILY YhbC-like, N-terminal domain 179 236 IPR035956 -
Tpr2g5394 331 MobiDBLite consensus disorder prediction 109 129 - -
Tpr2g5394 331 Hamap Ribosome maturation factor RimP [rimP]. 153 331 IPR003728 GO:0042274
Tpr2g5394 331 PANTHER OSJNBA0006B20.18 PROTEIN 3 330 - -
Tpr2g5394 331 Pfam RimP N-terminal domain 177 236 IPR028989 -
Tpr2g5394 331 Gene3D - 158 233 IPR035956 -
Tpr2g5394 331 PANTHER OSJNBA0006B20.18 PROTEIN 3 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5394 Tpr-Chr2 60781065 60784182 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5394 - - gmx:100783320 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5394 2 60781065 60784182 Tpr2g5394 2 60781065 60784182 ECH