Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5386 ATGCCACCAACAAAAGAGTTAGAGAAGAATCATGTGACATATATGCATACAGTTTCCGAAGCTGGTCGTCTTCTCCCTTCATCGAGTCGCTGGAACGCCATAGCACTTGATTTCAGCCTTACTCCTAAGTCTTCTGCTTCCTATGAATCCCTCCCTTCCCAATATCCAAAATCTGTTGACTGCAATCTTGTCATCACCGATAAGAAACACTTCCATATTTTTATTTTTGTTACAGTAGCAATAATTTTTGCTATCATAGCAGTAGCTTTGCTGGTGCACTTTTTACCTCTGAAGCACAACCATCAAGACTCTTCAATCAATCTCAAGTTGGCAATAAATCAAGCACTAACATTTTATGATGCCCAAAAATCTGGGAATTATCCAAAGAACAGTCCAGTGAAATATAGGGGAGACTCAGGATTAAAAGATGGCAATTCAGAAAAGACTAATCTTATTGGTGGATATTATGATTCAGGCAACAACATTAAGTTTACATTCACCACAGCTTATACTATGACCTTGTTGAGTTGGTCTGCAATGGAATATCAAACTAAATATGCTGATATTGATGAGCTGGATCATGTCAAGGATATCATCAGATGGGGTACTGACTATTTGCTTAAGGCATTTATTCCTCCAAATGGATCCAACCTTACACTGTATTCCCAGGTTGGAAGTACCATTAGTACTAATAATCAACAAAATGATATAAGTTGCTGGCAAAGACCTGAAGACATGAGTTATGCGAGACCGGTTTCAGTTTGTGATGGATCTGCAACAGATTTAGCTGCTGAAATTGTGGCAGCATTATCCGCCTCATCAATGGTGTTCAAAGAAGACAAAGATTACTCAGGAAAACTAGTTCAAGCAGCAGAAAACATATACGAGGCAGTTACGAATGAAGATCCTAAAAAGCAAGGAACCTACACCAGTGTTGATGCATGTGGAAATCAAGCGAGAATGCTTTATAACTCATCTAGTTACAAAGACGAGTTGGCTTGGGGAGCAACTTGGTTATTTCTTGCTACTAAAGAAACTCAATATCTTGCAAATGCAACTGAATTTTTTTTATCTGCAAAGAATGATGAAACAAATTTAGACAAAAAGGTCTTTTATTGGAATAACAAGCTCAATGCTGTTGCGGTTTTGCTTGCTGGTATTCGATATTTTCAAGATCCTGGCTTTCCATATGAGGATGTTTTGAAACTATCGTCAAATTCTACTCACTCCCTCATGTGTTCGTACCTTTTCAAAAAATATATGAGCAGAACACCGGGAGGATTGATTATCCCAAAACCTGAGAATGGGCCATTACTTCAGTATGCAGCAACAGCGTCTTTTCTCAGTAAATTGTATAGTGATTACATTGATCATCTCAAAATATCCGGAGCAAGCTGCGAAACCGATGAATTCTCAATCAAAATGCTTCGTGATTTCGCTAGCTCTCAGGTTAACTACATCGTAGGACAAAATCCTATGAAAATGAGCTATTTAGTGGGCTATGGTGACAAGTTCCCAGTCCATGTTCATCACAGAAGTGCATCTATCCCTTGGGATAAACGGACCTACAATTGCGACGATGGTAAGACATGGCTAAACTCGAAAAATCCGAATCCACATGTTCTTTTGGGAGCCATGGTGGGAGGACCAGACACAAATGATAATTTCATTGATCAAAGGAGCAATCAAAGGTTCACTGAGCCAACTATAGCAAGCAATGCCGGTTTAGTTGCAGCATTGGTTGCACTTCAAGATCTTCCTAATAATTCTGATGGCTTGAAAAACTCATTGTGGGAATGGACTTGA 1806 0.3909 MPPTKELEKNHVTYMHTVSEAGRLLPSSSRWNAIALDFSLTPKSSASYESLPSQYPKSVDCNLVITDKKHFHIFIFVTVAIIFAIIAVALLVHFLPLKHNHQDSSINLKLAINQALTFYDAQKSGNYPKNSPVKYRGDSGLKDGNSEKTNLIGGYYDSGNNIKFTFTTAYTMTLLSWSAMEYQTKYADIDELDHVKDIIRWGTDYLLKAFIPPNGSNLTLYSQVGSTISTNNQQNDISCWQRPEDMSYARPVSVCDGSATDLAAEIVAALSASSMVFKEDKDYSGKLVQAAENIYEAVTNEDPKKQGTYTSVDACGNQARMLYNSSSYKDELAWGATWLFLATKETQYLANATEFFLSAKNDETNLDKKVFYWNNKLNAVAVLLAGIRYFQDPGFPYEDVLKLSSNSTHSLMCSYLFKKYMSRTPGGLIIPKPENGPLLQYAATASFLSKLYSDYIDHLKISGASCETDEFSIKMLRDFASSQVNYIVGQNPMKMSYLVGYGDKFPVHVHHRSASIPWDKRTYNCDDGKTWLNSKNPNPHVLLGAMVGGPDTNDNFIDQRSNQRFTEPTIASNAGLVAALVALQDLPNNSDGLKNSLWEWT* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5386 601 Pfam Glycosyl hydrolase family 9 111 580 IPR001701 GO:0004553|GO:0005975
Tpr2g5386 601 Gene3D - 105 587 IPR012341 GO:0005975
Tpr2g5386 601 PANTHER ENDO-1,4-BETA-GLUCANASE 24 594 - -
Tpr2g5386 601 SUPERFAMILY Six-hairpin glycosidases 109 591 IPR008928 GO:0005975
Tpr2g5386 601 PANTHER ENDOGLUCANASE 24 594 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5386 Tpr-Chr2 60718450 60722108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5386 57 583 Glycoside Hydrolase AT5G49720 45.756 4.20e-143 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5386 K01179 - gmx:100805472 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5386 2 60718450 60722108 Tpr2g5386 2 60718450 60722108 ECH