Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5241 ATGTCACCGACACTCACGCGCTACCTCGCGTTTTTCATCTTCTCCGCCGCACTTTTTTCATTTTCCTCCGCCGAACTCCTCCAGTTATTCCGTGAAGCACCAGCATTCCGCAACGGTAGAGAATGTCCACCAAGCGAAACATCCTCCGTCATCCACATTGCAATGACACTCGACGCTACCTACCTCCGTGGCTCCATCGCCGGAGTCTTCTCCGTTCTTCAACACGCTTCATGTCCAGAAAACGTAGTTTTCCACTTCGTCACAACCACGCACCGTCGCCGACAAGAGCTTCGTCGTATAATCATTTCAACGTTCCCGTATCTGAATTTCCACATCTATCACTTCGATTCAAATCTTGTTAGAGGAAAGATCTCGTACTCGATTCGCCGCGCGCTTGATCAGCCACTCAATTACGCGCGTATGTACCTCGCCGATCTTGTTCCGGCGACCGCTCAGCGAATTATTTACTTCGATTCAGACCTAATCGTCGTTGACGACGTGGCGAAACTTTGGAGTATCGATTTAGGAGATCACGTGCTTGGCGCACCGGAGTATTGTCACGCGAACTTCACTAACTACTTCACTCACCGGTTCTGGTCGAATCCTACTTATGCGGCGTCGTTTAAAGGACGCGATGCATGTTACTTTAACACTGGTGTAATGGTGATTGATCTATGGAAATGGCGTGAAGGAAGATACACTGAGAAGCTTGAAAACTGGATGCGGATCCAGAAACGGAGTCGGATCTATGAACTTGGATCTCTTCCGCCGTTTCTTTTGGTGTTTGCAGGTAATGTGGAGAGAGTGGAGCATAGGTGGAATCAGCATGGTCTTGGTGGTGATAATGTGGAAGGGCTTTGCCGTGATTTGCATCCCGGTCCGGTCAGTCTTTTGCATTGGAGTGGAAAAGGGAAGCCATGGCTTAGAATTGATTCCAAGAAGCCTTGTCCGTTGGATAGTTTGTGGGCTCCTTATGATCTCTTTCGCCATTCTCCGTCCTTGTTTAATGATTCCTAA 1017 0.4867 MSPTLTRYLAFFIFSAALFSFSSAELLQLFREAPAFRNGRECPPSETSSVIHIAMTLDATYLRGSIAGVFSVLQHASCPENVVFHFVTTTHRRRQELRRIIISTFPYLNFHIYHFDSNLVRGKISYSIRRALDQPLNYARMYLADLVPATAQRIIYFDSDLIVVDDVAKLWSIDLGDHVLGAPEYCHANFTNYFTHRFWSNPTYAASFKGRDACYFNTGVMVIDLWKWREGRYTEKLENWMRIQKRSRIYELGSLPPFLLVFAGNVERVEHRWNQHGLGGDNVEGLCRDLHPGPVSLLHWSGKGKPWLRIDSKKPCPLDSLWAPYDLFRHSPSLFNDS* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5241 338 Pfam Glycosyl transferase family 8 52 310 IPR002495 GO:0016757
Tpr2g5241 338 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 52 319 IPR029044 -
Tpr2g5241 338 SUPERFAMILY Nucleotide-diphospho-sugar transferases 51 330 IPR029044 -
Tpr2g5241 338 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 15 337 - -
Tpr2g5241 338 PANTHER GALACTURONOSYLTRANSFERASE-LIKE 3-RELATED 15 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5241 Tpr-Chr2 58976297 58979722 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5241 27 338 Glycosyltransferase AT1G13250 78.125 1.86e-176 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5241 - - gmx:100802180 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5241 2 58976297 58979722 Tpr2g5241 2 58976297 58979722 ECH