Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5176 ATGGCTTCTACTTCAAGTTCTGCCTTGAAAAGATCTGATTCAATTGCTGATAGCATGCCTGATGCCTTGAAGAAAAGCCGCTTCCATATGAAGAAATGTTTTGCCGGGTTGGTTGCAAATGGGAAGAGGTTAGTGAGACTAAATCATATAATGGAAGAAGTGGAGAAAACAATTCAAGATAAAAATGAGAGGAAAAAGCTTTTGGAGGGATTATTGGGATACATACTAAGTTGCACTCAAGAGGCAGCTATTGTTCCACCATATGTTGTTTTTGCTGTGAGGCCTAATCCTGGATTTTGGGAATATGTTAAAGTGAATGCAGATGATTTGCAAGTAGATGGTATTGAGGCTTCAGATTACTTGAAATACAAGGAATTGGTATTTGATGAAAAATGGGCAAGTGATGAAAATGCTTTGGAGATAGATTTTGGGGCTATTGATTTCACCACACCTCATATGGCACTTTCATCTTCTATTGGAAATGGACTTGACTTTACTACAAGAATCTTGACCTCAAGGTTGACTGAAAGTTCACACTGTGAAAATCCATTACTTGATTACTTATTAAGCCTTAATCATCAAGGAGAGAATCTTATGATCAAAGACACTTTGAATACAATACCAAAGCTTCAGAAAGCACTTAAAATAGCAGAAGCTTATGTATCTGCTCACCACAAAGATACACCATACCAAAATTTTGAAAACAGGTTGAGAGAATGGGGATTTGATAAAGGGTGGGGAAACACTGCAGGAAGGGTTAAAGAGACAATGAAAATGCTATCTGAGGTACTAGAAGCAGGAGATCCAATTAAGTTGGAATCACTTTTCAGCAGGCTTCCAAACATGTTCAACATTGTTATTTTCTCTATTCATGGATATTTTGGACAAGCTGATGTTCTAGGATTGCCAGACACTGGAGGCCAGGTCGTATATATTCTTGATCAAGTAAGAGCATTAGAGGAAGAGTTACTCCAAAAGATTAAGTTGCAAGGCCTAAATGCAAAGCCTCAAATTCTTGTGGTTACACGTCTAATACCAAATGCAAAAGGGACAACATGTAACCAAGAACTTGAACCTATCATCAACACTAAGCACTCTCACATTCTAAGAGTCCCTTTCTATACAGAGAAGGGAATTTTATCTCAATGGGTGTCGCGATTCGATATCTATCCTTATTTAGAAAGATTTGCTCAGGATTCTACAATCAAGATTCTTGAACTTATGGATGGTAAACCTAACCTCATTATTGGAAATTATACTGATGGAAACTTGGTGTCATCCTTAATGGCTTCTAAACTTGGCGTAACTCAGGCAACCATTGCTCATGCTTTGGAGAAGACAAAATATGAAGATTCAGATGCTAAATGGAATAGTTTTGATGAAAAGTATCACTTTTCAAGTCAATTCACAGCTGATATAATCTCAATGAATTCTGCTGATTTCATCATAACTAGTACATACCAAGAAATTGCTGGAAGCAAGGATAGACCAGGACAATATGAAACTCACACTGCATTCACCATGCCGGGACTTTGTCGCGTAGTCTCTGGCATCAATGTGTTTGATCCAAAGTTCAACATTGCTGCTCCAGGAGCTGATCAATCTGTGTATTTTCCTTTCACCGAGAAAAACCGAAGATTGACCACTTTTCAACCTGCCATTGAAGAATTACTTTATAGTAAAAGTGAAAATGAAGAACACATTGGATTTTTGGAAGACAAGAAAAAACCAATAATTTTCTCAATGGCAAGGCTTGACAAAGTGAAAAACATTAGCGGCCTAGTCGAGTGGTACGCAAGGAACAATAGACTTAGAAGTTTGGTAAATCTTGTGATTGTCGGAGGATTCTTCGATCCTTCAAAATCCAAAGATAGAGAAGAAACAGAAGAAATCAAGAAAATGCATTTCTTGATTAAAGAACACAAACTTCATGGTCAGTTTAGATGGATTGCTGCACAAACCGATCGATATCGCAACGGAGAGCTTTACCGATGCATCGCGGATACAAAAGGAGCATTTGTTCAACCAGCATTGTATGAAGCTTTTGGTCTAACAGTGATTGAAGCAATGAACTGTGGATTACCAACTTTTGCAACAAATCAAGGTGGTCCAGCTGAAATTATAGTTGATGGTGTTTCTGGTTTTCATATTGATCCTCATAATGGAGATGAATCAATCAACAAGATTTCAGAATTTTTTGAAAAGTGCAAGATTAATTCTGATTATTGGAACATAATCTCTAAAGCTGGTCTTCAAAGAATCAATGAACGCTATACATGGAAGATATATGCAAACAAAGTGTTGAATATGGGATCAATTTATGGGTTTTGGAGAAAATTGAACAAAGAACAAATGTTAGCAAAGGAAAGATACATCCAAATGTTTTATAATCTTCAATTTAGGAACTTGGCAAGAAAGGTACCAATCCCTAGTGAGATACCTCAGGAACCTCAAGCGATATCAACAACTCCATCCAAAAAAGCAGAAGCAAAAGCACAATCTACTCACAATGAAGCTCAATCAAAAGCTGAAGCACCTCAAAACCACTTAGCAATAGCTGCAATACCATCCAAAATTAAACCTAAGCAAACACCAAGGGATGAAGGTTCAAGTAAGGAACTAGCTGCTTATAAACAAAGTGGTGATCTTTATTTTGGATTGCGTTGGTTGCTTTCAGGAATTGCTTTTATGTTCATCATTCATTACATCACTAATTATTTGGAACGTTTCTTCACATGGGAGCAATAA 2748 0.3712 MASTSSSALKRSDSIADSMPDALKKSRFHMKKCFAGLVANGKRLVRLNHIMEEVEKTIQDKNERKKLLEGLLGYILSCTQEAAIVPPYVVFAVRPNPGFWEYVKVNADDLQVDGIEASDYLKYKELVFDEKWASDENALEIDFGAIDFTTPHMALSSSIGNGLDFTTRILTSRLTESSHCENPLLDYLLSLNHQGENLMIKDTLNTIPKLQKALKIAEAYVSAHHKDTPYQNFENRLREWGFDKGWGNTAGRVKETMKMLSEVLEAGDPIKLESLFSRLPNMFNIVIFSIHGYFGQADVLGLPDTGGQVVYILDQVRALEEELLQKIKLQGLNAKPQILVVTRLIPNAKGTTCNQELEPIINTKHSHILRVPFYTEKGILSQWVSRFDIYPYLERFAQDSTIKILELMDGKPNLIIGNYTDGNLVSSLMASKLGVTQATIAHALEKTKYEDSDAKWNSFDEKYHFSSQFTADIISMNSADFIITSTYQEIAGSKDRPGQYETHTAFTMPGLCRVVSGINVFDPKFNIAAPGADQSVYFPFTEKNRRLTTFQPAIEELLYSKSENEEHIGFLEDKKKPIIFSMARLDKVKNISGLVEWYARNNRLRSLVNLVIVGGFFDPSKSKDREETEEIKKMHFLIKEHKLHGQFRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPHNGDESINKISEFFEKCKINSDYWNIISKAGLQRINERYTWKIYANKVLNMGSIYGFWRKLNKEQMLAKERYIQMFYNLQFRNLARKVPIPSEIPQEPQAISTTPSKKAEAKAQSTHNEAQSKAEAPQNHLAIAAIPSKIKPKQTPRDEGSSKELAAYKQSGDLYFGLRWLLSGIAFMFIIHYITNYLERFFTWEQ* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5176 915 PANTHER - 7 806 IPR012820 GO:0005985|GO:0016157
Tpr2g5176 915 Gene3D - 13 151 - -
Tpr2g5176 915 Coils Coil 44 71 - -
Tpr2g5176 915 Pfam Glycosyl transferases group 1 565 735 IPR001296 GO:0016757
Tpr2g5176 915 MobiDBLite consensus disorder prediction 815 844 - -
Tpr2g5176 915 MobiDBLite consensus disorder prediction 814 845 - -
Tpr2g5176 915 Gene3D Glycogen Phosphorylase B; 286 803 - -
Tpr2g5176 915 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 301 769 - -
Tpr2g5176 915 TIGRFAM sucr_synth: sucrose synthase 29 808 IPR012820 GO:0005985|GO:0016157
Tpr2g5176 915 Pfam Sucrose synthase 11 559 IPR000368 GO:0005985|GO:0016157
Tpr2g5176 915 Gene3D - 152 281 - -
Tpr2g5176 915 Gene3D Glycogen Phosphorylase B; 533 760 - -
Tpr2g5176 915 PANTHER SUCROSE SYNTHASE 6 7 806 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5176 Tpr-Chr2 57951189 57958888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5176 9 808 Glycosyltransferase AT4G02280 56.625 0.0 958
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5176 K00695 - gmx:100805344 1470.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5176 2 57951189 57958888 Tpr2g5176 2 57951189 57958888 ECH