Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5168 ATGAGGCCAGCGGTGAAAGCTATAATCGTCATTGTTTTCACCTCGACTCTCATCCGCTGCGTTTGTGGTGCTAACCACACTGTTGGCGGCGCTTCCGGCTGGGATATCATTTCCAATATGCAGGACTGGTCTTCCACTGCCACCTTCAATGTCGGCGATGATCTCGTATTCTCCTACACGCCGTTATACGATGTGGTGGAAGTGAACAAACAAGGTTACGACACGTGTACAATAGCAAACGCCATAGCCATTGATAACACCGGCGAAACAGTGATCCATCTCACCGATAACAGAACCCGTTACTTTGTCTGTGGGAGAATGCGCCATTGCAAACAAGGCCTCAAACTCAAAGTCCAAATTCAGGCCCAACCCAAAAACAACAACAACGGAACCAATAACAATCAAAACCAACCCGGCAACGGTGGGCAAAAACCATCTCCTCCGCCGCGTAATCTTCCACCGCGTAATGCTCCACCACCAAGTTATCATTCTCCTCCTAGTCCTCCTCCAGATGTACCTGCTGAAAAGCCTTCCGGTGCAGAACCATTGATTACACCTGTAATCATCTTAGCTTTCGCTTGGTTATCTTGGTACTTTACCGTTAATCATCTCATGGTTTATGCTTTTTTTTTGTTTTTTTGA 642 0.4688 MRPAVKAIIVIVFTSTLIRCVCGANHTVGGASGWDIISNMQDWSSTATFNVGDDLVFSYTPLYDVVEVNKQGYDTCTIANAIAIDNTGETVIHLTDNRTRYFVCGRMRHCKQGLKLKVQIQAQPKNNNNGTNNNQNQPGNGGQKPSPPPRNLPPRNAPPPSYHSPPSPPPDVPAEKPSGAEPLITPVIILAFAWLSWYFTVNHLMVYAFFLFF* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5168 213 SUPERFAMILY Cupredoxins 23 120 IPR008972 -
Tpr2g5168 213 MobiDBLite consensus disorder prediction 124 141 - -
Tpr2g5168 213 PANTHER BLUE COPPER PROTEIN 26 128 IPR039391 GO:0009055
Tpr2g5168 213 Gene3D - 23 126 IPR008972 -
Tpr2g5168 213 PANTHER COPPER ION BINDING / ELECTRON CARRIER PROTEIN-RELATED 26 128 - -
Tpr2g5168 213 MobiDBLite consensus disorder prediction 124 177 - -
Tpr2g5168 213 CDD Phytocyanin 24 120 - -
Tpr2g5168 213 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
Tpr2g5168 213 Pfam Plastocyanin-like domain 34 113 IPR003245 GO:0009055
Tpr2g5168 213 MobiDBLite consensus disorder prediction 142 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5168 Tpr-Chr2 57822641 57825067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5168 8 168 Miscellaneous Gene Families AT2G32300 35.802 5.58e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5168 - - gmx:102664120 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5168 2 57822641 57825067 Tpr2g5168 2 57822641 57825067 ECH