Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5162 ATGTCGCCGTCAAATGGGTTACATAACGGCGGTGGAAGTGGTGGTGTTGGTGGTGGTAATGGGTTGAGTTATATTGAACATCATGTTTCAAAATTTGATACTCTTGCTGGTGTTGCTATTAAGTATGGTGTTGAGGTAGCTGATGTGAAAAGGATGAATGGTTTGGCCACGGATCTCCAAATGTTCGCACTGCAGACATTGAGAATTCCACTACCAGGACGACATCCGCCATCTCCGGTTCCTGATGAACCTGCCAAGTTGAGAGAAAATAGCAGCGAAAGAAGACCTCCACGAATAGGTCAATCTGCGATGAAGGAACCTCTCCAGTCCTTAAGACTGAAACCACCTAAACAGAATATATCTCCAGCTATGACCATATTACAGAAATACTACGGCCTCGATTCGTCGAGTTCCAGAGAAACATCTGGAGAAACTGAAATGGCAATGTATACTTCTTCTACTTCAGATCATTCCAGAGACGAATGGCTTCCAAAACCCTCACCAATTCCAAACCATCATTCCAAGTCAACAAATTTAGTGTTTGATCTACTAACTGGGAACGATGAAGTGTCGGATTATGGGCCTTTTACAGATATCGGTGACGGGGGAGCTGATAAGTCTGATGAGAAATCCGTCCGCAGACGTCAAAAAGCTGACGTTGATAATGGAGGTACTACACCAGAAAAGATTTTCAAAGAAGGCAATAATAGTAATGGATCGAACGGTTCTTCCACTGGAAAAACATTTTCCATGAGGCCAAAATCAGCCAGTCGAGCCTCGCTGTTTTCTGAGACAGAATCAGGATGGTTAGATTCTATTCCAGTAGGGTTAGGAGAATCCATATTTACCGATGGACTTTCTGGAGTGCGCAAATCATCAAGCGCATCAAGCCTCAGAGAGCAGGAAAAGTATAATTCAGCAGCAACAGCCTGGCCGACCATTTCCAAACCTATCTTTGATGGCTTACCTATCCCAATAACTGGCCGCAGAAGCAAAACTGCCCTTGATTAG 1011 0.4411 MSPSNGLHNGGGSGGVGGGNGLSYIEHHVSKFDTLAGVAIKYGVEVADVKRMNGLATDLQMFALQTLRIPLPGRHPPSPVPDEPAKLRENSSERRPPRIGQSAMKEPLQSLRLKPPKQNISPAMTILQKYYGLDSSSSRETSGETEMAMYTSSTSDHSRDEWLPKPSPIPNHHSKSTNLVFDLLTGNDEVSDYGPFTDIGDGGADKSDEKSVRRRQKADVDNGGTTPEKIFKEGNNSNGSNGSSTGKTFSMRPKSASRASLFSETESGWLDSIPVGLGESIFTDGLSGVRKSSSASSLREQEKYNSAATAWPTISKPIFDGLPIPITGRRSKTALD* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5162 336 MobiDBLite consensus disorder prediction 194 252 - -
Tpr2g5162 336 MobiDBLite consensus disorder prediction 229 252 - -
Tpr2g5162 336 ProSiteProfiles LysM domain profile. 25 69 IPR018392 -
Tpr2g5162 336 MobiDBLite consensus disorder prediction 134 157 - -
Tpr2g5162 336 MobiDBLite consensus disorder prediction 134 174 - -
Tpr2g5162 336 MobiDBLite consensus disorder prediction 70 105 - -
Tpr2g5162 336 PANTHER LOC443603 PROTEIN-RELATED 19 336 IPR045030 -
Tpr2g5162 336 Gene3D LysM domain 21 76 IPR036779 -
Tpr2g5162 336 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 19 336 - -
Tpr2g5162 336 CDD LysM 33 69 IPR018392 -
Tpr2g5162 336 MobiDBLite consensus disorder prediction 202 222 - -
Tpr2g5162 336 SUPERFAMILY LysM domain 25 70 IPR036779 -
Tpr2g5162 336 SMART LysM_2 26 70 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5162 Tpr-Chr2 57725055 57728792 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5162 - - gmx:100786430 465.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5162 2 57725055 57728792 Tpr2g5162 2 57725055 57728792 ECH