Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5161 ATGGCAGTAACCACCTCAACACCAACCTCACCTCCATCAATGGCACAAGATCTACTCAATTCCCTTCCCAAAACCCTAAAACTCAAAACAAAACAACAAGAGCTTCTAATTCGTGTCACAACTCTCGGTTTAATCTACATCCTCGCATTCATCACTCGTCTCTTCAGTGTTCTTCGTTACGAATCCATGATCCATGAATTCGACCCATATTTCAACTACCGCACAACGCTTTACCTCACAGAACACGGTTTCTCCGAGTTTTGGAACTGGTTTGACTCAGATTCATGGTATCCACTCGGTAGAATCATCGGCGGTACACTTTATCCCGGTCTTATGCTCACCGCCGCCGCGTTATACAAAATCCTCCATTTCCTCCGATTCGCCGTTCATATCCGTGAAGTCTGTGTTCTAACGGCGCCATTTTTCGCGTCGAATACTGCTATTGTCGCTTACTTCTTTGGTAAAGAAGTTTGGGATTCAGGTGCGGGGATTGTTGCGGCAGCGTTGATTGCGATTTGTCCTGGTTACATTTCCAGATCGGTTGCTGGATCTTATGATAATGAAGGAGTTGCGATTTTTGCATTGTTGTTAACTTTTTATCTGTTTGTGAAAGCTGTTAATACTGGATCGTTATCGTGGTCTTTGGCTTCGGCTTTTGGTTATTTCTATATGGTTTCAGCTTGGGGTGGTTATGTGTTTATCATCAATTTGGTGCCACTTTATGTGTTGGTGTTGTTGGTAACTGGAAGATATTCATTGAGACTTTATGTTGCTTATAATTGTATGTATGTTTTGGGAATGTTGCTTGCTATGCAGATTAGGTTTGTTGGGTTTCAACATGTTCAATCTGGAGAACATATGGCTGCTATGGGTGTCTTTTTCTTGCTTCAGGTGTTTTTCTTTTTGGACTGGGTAAAGCATTTGCTTGGAGATGTAAAATTGTTTCAAGCATTTTTGAGGATCACTGTAACTGGTGCAGTTAGTGTTGGTGCCATTGCCTTGGGAGTAGGCACGGCATCTGGTTACATATCACCATGGACCGGAAGGTTTTATTCCTTGCTCGATCCAACATATGCTAAGGATCATATTCCAATTATTGCTTCTGTCTCTGAGCATCAGCCTACTGCTTGGTCATCCTTCATGTTTGATTTTCATATATTGCTGTTCCTTTTCCCTGCTGGGCTCTATTTTTGCTTCAAGCGCTTGTCAGATGCCACAATCTTCATAGTGATGTATGGTCTTACAAGCATGTACTTTGCTGGTGTTATGGTTCGACTAATTCTTGTTGCTACACCCGCTGTATGCCTCATTAGTGCTATTGCAGTTTCTGCCACTGTGAAGAACTTGACTCGGGTTGTGAGGGCAAAAGTCCAAACCCTACAAAGTGGTTCTGGTAAAGGAACTAGTGCTTCAAAAGGTTCTTCTAAGGGTGTAATTGATAACTCCCAGCCTTTCCAAAAGAACGGTGCTGTGGTGTTACTTCTCGGTGCCTTTTATCTTCTCAGTAGATATGCTATTCACTGTACTTGGGTTACATCTGAGGCATACTCATCTCCCTCAATTGTCTTGGCTGCAAGAGGTGCCCACGGCCAGAGGGTCATCTTTGATGATTATCGTGAGGCTTACTTTTGGCTTCGCCAGAACACTGCACCAGATGCCAAGGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAACAACACCTGGAACAATACACACATTGCAACTGTTGGGCGTGCAATGTCATCTTATGAGGATGAGGCTTATGACATAATGAGATCGCTTGATGTTGACTATGTGTTAGTCGTGTTTGGAGGTGTTACCGGTTATTCCTCTGATGATATTAATAAATTTCTATGGATGGTGAGAATTGGCGGCGGAGTTTTTCCTGTAATAAAGGAACCTGATTACCTCGTCAATGGAGAGTACCGTGTAGATAAAGGTGCAGCTCCAAAGATGTTGAACTGTCTCATGTACAAGCTGTCTTATTATCGGTTTGGAGAGCTGACAACAGAATATGGCAAACCACCTGGGTATGATCGCGCCAGAGGCGTTGAAATTGGAAATAAAGACATAAAACTGGAGTACTTGGAGGAGGCGTTTACTACCCAGAATTGGATAGTTCGTATTTATAAAGTGAAACCACCTAAAAACAGGTGGTAA 2196 0.4276 MAVTTSTPTSPPSMAQDLLNSLPKTLKLKTKQQELLIRVTTLGLIYILAFITRLFSVLRYESMIHEFDPYFNYRTTLYLTEHGFSEFWNWFDSDSWYPLGRIIGGTLYPGLMLTAAALYKILHFLRFAVHIREVCVLTAPFFASNTAIVAYFFGKEVWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLSWSLASAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSLRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVKHLLGDVKLFQAFLRITVTGAVSVGAIALGVGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFLFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTRVVRAKVQTLQSGSGKGTSASKGSSKGVIDNSQPFQKNGAVVLLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGQRVIFDDYREAYFWLRQNTAPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYDIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5161 731 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 22 731 IPR003674 GO:0004576|GO:0006486|GO:0016020
Tpr2g5161 731 Gene3D - 534 684 - -
Tpr2g5161 731 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B 22 731 - -
Tpr2g5161 731 Pfam Oligosaccharyl transferase STT3 subunit 41 517 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5161 Tpr-Chr2 57717102 57722534 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5161 6 730 Miscellaneous Gene Families AT1G34130 86.027 0.0 1278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5161 K07151 - gmx:100780916 1328.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5161 2 57717102 57722534 Tpr2g5161 2 57717102 57722534 ECH