Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5159 ATGGCACTGACTAATGCTGCAGTGATCGGTCCTTCTCTCTATGGCGTTGCTCGTATCACGAAAGTTCCATTTCTAGGTTCAAAAGGCGAAGTTGCTTCTGGATTTTCTGTTGGGTCCCATTCAGGGAAAAGTGATGTTGTACTTGAAAGAAGGAAGTTGAAATCTGTTAATAATAATAGTAACCGCATTGTTGAAAATGTGCAGTTGAAATCCACTGTTGAAATCCCAGTTTCTTGTTATCAGCTTATTGGCGTTCCTGATCGTGCTGAGAAAGATGAAATTGTTAAGGCAGTTATGAGTTTAAAAAATGCAGAAATTGACGAAGGTTACACAGTGGGTGTTGTTGCATCTCGCCAGGATCTTCTGATGGATGTTAGGGATAAACTCCTTTTTGAGCCAGAATATGCTGGTAACCTGAAGGAAAAGATTCCCCCTAAATCTTCCCTTCGTATTCCTTGGTCTTGGTTGCCGGGTGCTCTATGCCTTCTTCAAGAGATTGGAGAATCAAAATTTGTGCTGGACATTGGAAGAACAAGTCTTCAGCATCAAGATGCGAAGCCATATGCAGATGATTTAGTTCTTTCTATGGCATTAGCTGAGTGTACAGTTGCGAAGATTGGCTTTGAGAAGAAGAAAGTATCTCAAGGTTTTGAAGCTCTTGCTCGTGCTCAATGTCTTCTAAGAAGTAAACCATCTCTTGCAAAAATGACACTTCTATCTCAGATTGAAGAATCTCTTGAAGAACTTGCACCCGCTTGCACCTTGGAGTTACTGAGCATGCCAAATACCCCTGAAAATGTTGAACGAAGACGAGGAGCAATTGCGGCTTTACGCGAATTAGTTAGACAGGGTCTTGATGTTGAAGCTTCATGTCAAGTGCAGGACTGGCATTCTTTTCTAAGCCAAGCGTTTGGCAATTTACTGGCTAATGAGATTGTTGATCTTCTTCCTTGGGATAGCTTAGCCGTTATGCGGAAGAATAAGAAGACCATTGAATCACAAAATCTAAGGGTAGTAATTGATTCAAGCTGTTTCTATAGAGTTTTTACAGCTCATATGGCACTTGGATTTTCCAGCAAGCAAAAAGAGTTGATTAACAAGGCAAAAATCATATGTGAATGTTTGATAGCTTCAGAGGGCATTGATCTGAAATTTGAGGAAGCTTTTTGCCTATTCCTTCTTGGACTGGGCACAGAGGCTGAGGCAGTTGAAAAGCTGAAGCAGCTTGAGCTAAACTCAAATCCAAAACATAATTCAATCTTGGGGAAGGCAATAATGGATGCTTCAGCTGCAAACCCATCGTTGGAATTGTGGCTTAAGGATTCTGTGCTTGACTTATATCCAGATACTAAAGGTTGTTCTCCTGCTTTGGCCAATTTCTTTAATGCTCAAAAGAAATTTTCTGGAAGCAAGAACTCTAAAGGATCTTCACAAATGTTTCCTACTATATGTCATAGACCTCTATCATCATCGGGTTCTGTAGAACGGAAAGATTTTGAGGAACCTCGCTCATATATGAGCTCTTCCCCAAATTTGGGGTTTGCTGTCAAGCAGCTGACTCCTACTGATTTGCAGGGTTCACTGCTATCCGGCAAAAATGAAAACGAACGCAATCCTAGTGAACCACATGTTAAAGTAAACAGGAACCTTGGCACGTATAACAATGGTATTTGGAATAATCACTTTACTCGTGCTCAAGTATTTGAAAGAATAACACACGTTACCATCTTGGGTTGTATCGTATTTGCTTCAATGAAGTTGTTGGGAATGAACTTGGGCAAGAATTTTACTGGTTCTAACTGGGCTTCCACAAAAGCCCACAATAGCACTTCTTGGACTGCAAATTCATCTGTTAACTACAGTGTAGGCCCGACATATACGAGGCAAAGTTCTATTGCCAACAAACTGAAGAGAATTATGTCAACGGTTAAGTTACAGTTTTTGCCCAAGTCAGATGCTGGAAGTCGCGGTGATTTACACAGTTCTCTTACCTCATCATCTTCCCCTATTAATGTGTATAGGAGGCTGATGCCTGTGGAAGAAGCAGAAACCCTTATTAGGGAATGGCAAACAATCAAAGCTGAAGCTTTGGGGCCTAGCCATGAAGTAAATGGCCTAGCTCAAGTCCTTGACGAATCTATGCTTTCTCAGTGGCAAGCCTTGGCTGATGCTGCAAAAGAAAAATCTTGTCACTGGAGATTTCTTTTGCTAAAATTATCTGTCCTTAGAGCTGACATTCTATCAGATGGAAATGGATCAGACATAGCAGAAATAGAAGCCCTTTTAGAAGAAGCAGCCGAACTTGTTGATAATTCTCAGCAAAAGAACCCAAACTACTATAGCACTTACAAAGTTCAGTATGTTGTGAAGAGGCAAGATGATGGATCATGGAAGTTCTGTGAAGCCGATATTCAAACATGA 2421 0.4089 MALTNAAVIGPSLYGVARITKVPFLGSKGEVASGFSVGSHSGKSDVVLERRKLKSVNNNSNRIVENVQLKSTVEIPVSCYQLIGVPDRAEKDEIVKAVMSLKNAEIDEGYTVGVVASRQDLLMDVRDKLLFEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEIGESKFVLDIGRTSLQHQDAKPYADDLVLSMALAECTVAKIGFEKKKVSQGFEALARAQCLLRSKPSLAKMTLLSQIEESLEELAPACTLELLSMPNTPENVERRRGAIAALRELVRQGLDVEASCQVQDWHSFLSQAFGNLLANEIVDLLPWDSLAVMRKNKKTIESQNLRVVIDSSCFYRVFTAHMALGFSSKQKELINKAKIICECLIASEGIDLKFEEAFCLFLLGLGTEAEAVEKLKQLELNSNPKHNSILGKAIMDASAANPSLELWLKDSVLDLYPDTKGCSPALANFFNAQKKFSGSKNSKGSSQMFPTICHRPLSSSGSVERKDFEEPRSYMSSSPNLGFAVKQLTPTDLQGSLLSGKNENERNPSEPHVKVNRNLGTYNNGIWNNHFTRAQVFERITHVTILGCIVFASMKLLGMNLGKNFTGSNWASTKAHNSTSWTANSSVNYSVGPTYTRQSSIANKLKRIMSTVKLQFLPKSDAGSRGDLHSSLTSSSSPINVYRRLMPVEEAETLIREWQTIKAEALGPSHEVNGLAQVLDESMLSQWQALADAAKEKSCHWRFLLLKLSVLRADILSDGNGSDIAEIEALLEEAAELVDNSQQKNPNYYSTYKVQYVVKRQDDGSWKFCEADIQT* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5159 806 Pfam ARC6-like, IMS domain 682 799 IPR025344 -
Tpr2g5159 806 Coils Coil 755 775 - -
Tpr2g5159 806 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 54 805 IPR044685 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5159 Tpr-Chr2 57685994 57692637 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5159 - - lja:Lj2g3v0609710.1 1306.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5159 2 57685994 57692637 Tpr2g5159 2 57685994 57692637 ECH