Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5153 ATGAAATGGAGGGATAGGATTAACTCACATTATATCCTCAATATTTTTGCTCAATGGAGAAAATCCGTTTCCCTTGGAAATAAAGGTACATACAACTATATAAACAGTTTCATAGTCCTTAGAGAATCCGAACCTATATTCAAATATCTAGGGGACATGGCACAAAATGAGAATGAGGATAGGGCAGTTGACAGCGGTTTTGAATTTGAACAACATGTTGATGATGAACAAAAAAAATTGGAACAACAAAAGAGTACAAGGTTGTTGGAAGAAGAAGAAACTTCTGTTGAGAAAGTGTTTAAGCACTTATTGGTTCCATCATGGAAGAATCAATTAACTTTCAGAGCTTTTGTGGTTAGCTTTTTTCTCAGCATACTTTTCAGTTTCATTGTGATGAAGCTTAATCTCACTACTGGGATTATACCTTCACTTAATGTCTCTGCTGGTCTTTTGGGATTCTTCTTTGTCAAAACTTGGACAAAGTTTTTGGAAAAATCTGATTTGTTGAAACAGCCTTTTACAAGACAAGAGAATACTGTTATTCAGACTTGTGTTGTTGCTTCCTCTGGAATTGCTTTTAGTGGAGGATTTGGGAGTTACCTATTTGGAATGAGTGAACATGTAGCCAATCAATCTTCAGACACTAGTGATTTTAAGGATCCAAAATTGGGATGGATAATTGCTTTCCTCTTTGTTGTTAGTTTTTTGGGCCTCTTCTCAGTTGTACCTCTTAGAAAGATTATGGTTATTGACTTCAAATTAACATATCCAAGTGGTACAGCAACTGCTCTTCTCATCAATAGCCTCCACACTCCTCAAGGAGCTAAACTAGCAAAGAAGCAAGTTAAATTGTTGGGAAAATTCTTCAGTTTGAGTTTCTTATGGGGTTTCTTTCAATGGTTCTATACAGCTTCTGATGGGTGTGGATTTCAAGCCTTCCCTTCATTAGGGCTCAAAGCATATGATAATAGGTTTTTCTTTGATTTTTCGGCACTCTATATTGGTGTGGGAATGATTTGTCCATATATCGTAAATATATCAGTTCTCCTTGGAGGAATTCTTTCGTGGGGAATAATGTGGCCTCTCATAAAAACAAGAGAGGGTCATTGGTACAAAGCAGGCCTTGGTGACGGCAGCCTTGAAGGAATCCAAGGTTATAGGGTATTTATAGCCATAGCAATCATCCTGGGAGATGGTTTATACAACTTTGTCAAGGTTCTAACTCATACCTTATTTAGTTTGTTCAATCAAATCCGGAACAAACAAAGGGCGAACGCTCTACCTGTTGCGCATCAAGACTCCTCCTCAAGTCCAGAGCTATCTTATGACGATCAGCGGCGGAAACAACTATTTCTTAAAGATCAAATTGCTACATGGTTTGCAGTTGGAGGATATGTTGCTATTGCGGCCATCTCTACAGCCACATTGCCACACATCTTCCCTCAACTAAAATGGTATTATGTACTTGTTATATACCTAATTGCTCCAACCTTAGCATTTTGCAATGCTTATGGTTCTGGACTAACAGATTGGTCCCTAGCATCAACCTACGGAAAACTAGCCATCTTCACAATTGGCGCATGGGCCGGTGCATCACATGGTGGAGTTCTAGCTAGTCTAGCAGCCTGTGGAGTTATGATGAACATCGTTTCGACAGCTTCTGACTTGATGCAAGATTTCAAAACCGGTTACCTTACCCTGGCTTCGCCACGGTCCATGTTTGTGAGCCAAATAATCGGCACAGCAATGGGATGTGTGATTTCGCCTTGTGTGTTTTGGATTTTCTACAAAGCATTTCCTGACCTAGGAACACATAAAAGTCAATACCCTGCACCGAACGCAATTGTGTTCCGCAACATGGCAATACTTGGAGTACAAGGATTTGGTTCTTTACCAGATAATTGTCTACTGATTTGTTATATATTCTTTGGTGCGGCGATTGGGATTAACTTGATTAAGGATTTGGTTGGTAAAGTAGGGAGGTTCATACCACTTCCAATGGCTATGGCAATACCTTTTTATTTAGGACCTTATTTTGCCATTGACATGTGTGTTGGAAGTTTCATATTGTTTGTTTGGGAAAAGCTTAATAAGGCCAAGGCTGATGCTTTTGCACCTGCTGTTGCTTCTGGTTTGATATGTGGTGATGGAATATGGACTTTGCCTGCTTCAATACTTGCTATTGCTGGAATTAAGCCACCCATTTGCATGAAGTTCTTGTCAAGGGCCACAAATAATAGGGTTGATGTTTTCTTAGGGAATTAA 2265 0.3938 MKWRDRINSHYILNIFAQWRKSVSLGNKGTYNYINSFIVLRESEPIFKYLGDMAQNENEDRAVDSGFEFEQHVDDEQKKLEQQKSTRLLEEEETSVEKVFKHLLVPSWKNQLTFRAFVVSFFLSILFSFIVMKLNLTTGIIPSLNVSAGLLGFFFVKTWTKFLEKSDLLKQPFTRQENTVIQTCVVASSGIAFSGGFGSYLFGMSEHVANQSSDTSDFKDPKLGWIIAFLFVVSFLGLFSVVPLRKIMVIDFKLTYPSGTATALLINSLHTPQGAKLAKKQVKLLGKFFSLSFLWGFFQWFYTASDGCGFQAFPSLGLKAYDNRFFFDFSALYIGVGMICPYIVNISVLLGGILSWGIMWPLIKTREGHWYKAGLGDGSLEGIQGYRVFIAIAIILGDGLYNFVKVLTHTLFSLFNQIRNKQRANALPVAHQDSSSSPELSYDDQRRKQLFLKDQIATWFAVGGYVAIAAISTATLPHIFPQLKWYYVLVIYLIAPTLAFCNAYGSGLTDWSLASTYGKLAIFTIGAWAGASHGGVLASLAACGVMMNIVSTASDLMQDFKTGYLTLASPRSMFVSQIIGTAMGCVISPCVFWIFYKAFPDLGTHKSQYPAPNAIVFRNMAILGVQGFGSLPDNCLLICYIFFGAAIGINLIKDLVGKVGRFIPLPMAMAIPFYLGPYFAIDMCVGSFILFVWEKLNKAKADAFAPAVASGLICGDGIWTLPASILAIAGIKPPICMKFLSRATNNRVDVFLGN* 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5153 754 Coils Coil 73 93 - -
Tpr2g5153 754 Pfam OPT oligopeptide transporter protein 111 726 IPR004813 GO:0035673
Tpr2g5153 754 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 76 753 IPR045035 GO:0035673
Tpr2g5153 754 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 110 726 IPR004813 GO:0035673
Tpr2g5153 754 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL8-RELATED 76 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5153 Tpr-Chr2 57641961 57648265 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5153 68 652 Organic Solute Cotransporters AT1G09930 22.018 7.12e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5153 - - mtr:MTR_6g077870 1224.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5153 2 57641961 57648265 Tpr2g5153 2 57641961 57648265 ECH