Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5027 ATGGGTTCCGCTTCTCTTCTCAATTCTTCCGATTCATCGCAACAAGGTGTTAAGGACAACAATAGTATAGAGGAACCTGTTGCTTCGAACACCCAAGAGGAAGTTATGGCTGGTGGAAAACAAAAGAAGCGAGGTTTGTCAGAGAGCAGTGAGCAGCCTGCTCCTACTCGTAAAATGCCAAAGCGATCAGTGAGTGCTGCACGCAAAAATTTGAAGGAGCAGACTTTTTCCATATCCGACAAATCTTCTCTTATTGAAACAAAGCAGGATCAGATTGTAGAAGAAGAATTTCTAGCAGTCCGTATGACTGCTGGACAGGATGATGGCCGTCCGAATAGAAGACTTACGGACTTTATCCTTCATGATGAAACTGGTGCAGCGCAACCACTTGAGATGCTTGAAATCAACGATTTATTCATCACTGGACTTATATTGCCACTTGAAGGAAGTGTAGACAAGAAAAAAGAGGAAGGTGTTAGATGTGAAGGATTTGGACGAATTGAGTCGTGGGATATATCTGGCTATGAAGATGGCTCTCCAGTGATATGGATTTCCACTGATATTGCTGATTATGATTGCCAGAAAGCAGCTGCAAGTTATAAAAAATATTACGATCATTTCTTTGAAAAGGCACGTGCTTGCTTAGAAGTATACAAAAAACTAGCAAAGTCTTCTGGTGGAGACCCTGACATAAGTCTTGACGAGTTACTTGCTGGCATGGCACGGTCAATGAGTGGTAGCAAGTACTTTTCTGGAACTGCGTCTTTAAAGGAGTTCATTATTTCTCAGGGCGAGTTTATTTATAAGCAGCTCATTGGTTTAGAGTTGAAGCCAAATGACAAGGGGTTTGAAGACATTCCTGCTCTGATTGCTCTTAGAGAGGAAAGCAATAAACAAGCAAACTTTGCAAGCGCACAAGTGATGCCATCGAATGCGACTTTAAGGATTGGTTCGGGAACTGCAGGTGAGGAGAAAAAGAATCATATGGATTCTGTAGATGAAGAAGACGAGGATGCGAAGTTAGCGCGACTATTGCAGGAAGAAGAGGATTGGAAATCTCGGAAGCAGAGGAAAAACCCTAGGTCATCCTCTTCATCTAACAAATTCTATATCAAAATTAATGAAGATGAGATCGCTAATGATTACCCTCTCCCTGCTTATTACAAAACTTCTCTTCAAGAAACAGATGAGTTTATTGTTTTTGATAATGACTATGACGTGTATGACATTGAAGATCTTCCTAGAAGCATGCTGCATAATTGGGCTTTATACAACTCTGATTCTAGATTGATTTCTTTGGAACTTCTTCCTATGAAACCTTGCTCAGAGATAGATGTTACAATCTTTGGATCAGGCCTAATGACGGCAGATGATGGAAGTGGGTTCAATCTTGATACAGAGGCAGGCCAATCTTCCAGTGCTTCCGGAGCACAGGCCACGGATGGAATTCCAATTTATCTGAGTGCCATAAAGGAATGGATGATTGAATTTGGATCGTCTATGGTTTTCATATCCATCCGAACAGATATGGCCTGGTATAGGCTTGGAAAACCGTCAAAGCAGTACACTCCTTGGTACGACACCGTATTGAAAACTGCAAGGATTGCTATAAGCATTATCACTTTGTTAAAGGAGCAGAGCCGTGTATCGAGACTTTCCTTTGCAGATGTCATAAAAAAATTATCTGAATATAAGCAAGACCATAAGTCCTACATTTCTACTGATCAAATGGCTGTTGAGAGATACATTGTTGTCCATGGACAGATAATTCTGCAACTGTTTGCAGAATTTCCAGATGACAAGATCAGGAAGTCTGCTTTTGTGATCGGTCTTGCTAAAAAAATGGAAGAACGACACCATACCAAATGGTTAGTGAAGAAGAAGAAAGTGATGCCAAGGAGTGAGCCAAATTTAAATCCTAGGGCAGCAATGGCTCCTGTTGTATCCAAAAGGAAAGCTATGCAAGCTACAACCACAAAGCTGATCAATAGAATATGGGGAGAGTATTACTCAAACCACTTGCCGGAGGATTTGAAAGAAGGAACTAATAGTGAAGTAAAGGATGATGATGAAGTCGATGAACAAGAACAGGAAGAGAATGAAGATGCGGATGCGGATGAGGAGGAGACAGTACTGTTGGAGGGAACACAAAAGCCGCACTCAGTTTCCAAAGAAACTAAAGCATTTTCTGATGAAAGAGAAATTAGATGGGAAGGGGATCCTGAAGGGAAGACCAGTTCCGGATGCCTTCTTTATAAGCAGGCAATTATTCATGGTGAAGTTGTTTCTGTTGGAATATCTGTGTCAGTTGAAGTTGATGAATCTGATGAACTTCCTGATATATATTACATTGAATATATGTTTGAAGCAAAGAATGGGAGAAAAATGTTTCATGGTAGGATGATGCAGCATGGTTGTCAGACTGTTCTTGGCAACGCTGCCAATGAGAGAGAGGTGTTTTTGACTAATGAGTGCAGGGATTTGGGACTTCAGGATGTTAAGCAGACAAATGTTGTAAGCATCCAAAAAATGCCTTGGGGGCATCATTATCGAAAGGATAATATTGTTGCGGATAAACTTGATAGGGAGAGAGCAGAAGAAAGGAAAAAGAAAGGACTATCTACTGAATATTACTGTAAAAGCTTGTACTGGCCTGAAAGAGGTGCTTTCTTCAGCCTTCCATTTGATAAGCTGGGCCTAGGGTCTGGCTTCTGTCAATCTTGCAAGTTAGAGGAAGCTGAAAAAGAGAAACAGATTTTCAAAGTAAATTCATCAAAGTCTAGTTTTGTATTGGAGGGAACAGAATATTCTCTCAATGACTATGTTTATGTCAGTCCTTTTGAATTTGAGGAAAGGATAGAGCAGGGGACTCATAAGAGTGGGAGGAATGTAGGGTTGAAAGCTTATGTTGTGTGCCAAGTGCTTGAGATCATTGTCAAAAAGGAAACAAAACAAGCTGAAATAAAATCTACAGAGCTCAAAGTCAGAAGATTCTTCCGACCAGAAGATGTATCAAGTGAGAAGGCATACTGCTCTGATGTACAAGAGGTGTATTACAGTGATGAAACGTATACAATCTCTGTACAATCCATAGAGGGTAGATGCGAAGTCAGGAAAAAGATTGATGTCCCTGAAGGATGTGCCCCTGGAGGAATCTTCCATAATGTCTTTTTCTGCGAGCACTTGTATGATCCTGCCACTGGATCCCTCAAGAAGTTGCCAGCTAATATTAAAGTCAAATATTCTAGTGGACATACAGCTGAGGCTGCTGCTAGAAAGAAAAAGGGAAAATGTAGAGAAGGAGATAGCATTTCAGAGCCTGATCTTGAAAGAAAAACATCAAATGATAAACGGTTATCAACCTTGGACATATTTGCAGGATGTGGTGGCTTATCAGAGGGGCTGCACCAGTCAGGTGTTTCATCAACTAAATGGGCTATTGAGTATGAAGCGCCAGCTGGGAATGCATTTAAAGCTAACCATCCTGAAGCATTGGTATTTATTGACAATTGTAATGTTATTCTTAGGGCTATAATGGAGAAATGCGGGGATATAGAAGATTGTATCTCAACGACTGAGGCTGCAGAATTGGCCTCTAAACTTGATGAGAAGGATTTGAGTAGCTTACCCTTGCCTGGGCAAGTTGATTTCATTAATGGGGGTCCTCCATGCCAGGGTTTCTCAGGAATGAATCGATTTAACACAAGCACTTGGAGTAAAGTCCAATGCGAGATGATATTAGCATTCTTGTCATTTGCTGATTATTTCCGGCCAAGATATTTCTTGTTGGAGAACGTGAGGAATTTTGTGTCTTTCAATAAAGGACAGACGTTCCGTTTAACTTTGGCATCACTTCTTGAGATGGGTTATCAGGTGAGGTTCGGTATCCTTGAGGCTGGAGCTTTTGGTGTTTCACAGTCACGAAAAAGGGCATTCATATGGGCTGCCTCTCCAGAAGATGTGCTTCCTGAGTGGCCAGAACCAATGCATGTCTTTTCTGCCCCCGAATTGAAAATCAAATTGTCCGAAAATGTCCAGTATGCTGCTGTTCGCAGTACTGCAAATGGTGCCCCGTTACGTGCAATAACGGTTAGAGATACCATTGGTGAACTCCCAGCTGTAGGCAATGGAGCCTCTAGGACAAACATGGAGTATCAAAGCGATCCTGTTTCCTGGTTTCAAAAGCAGATTCGAGGCAATATGGCTGTGCTGACCGATCACATATCAAAGGAAATGAATGAGCTGAACTTGATTCGTTGCCAGAAAATTCCTAAGAAACCGGGTTGTGATTGGCGTGATCTTCCAGATGAAAAGATAAAATTGTCTAATGGACAACTGGTTGATTTGATACCATGGTGCTTGCCAAACACAGCTAAAAGGCATAATCAATGGAAGGGTCTCTTTGGTAGGTTGGATTGGCAAGGGAATTTCCCAACTTCCATTACTGACCCTCAACCTATGGGGAAGGTTGGAATGTGCTTCCATCCAGACCAAGATCGAATTCTCACAGTTCGTGAATGTGCCCGGTCTCAAGGCTTCCCAGATTGCTATCAGTTTTCTGGAAACATTATACACAAGCACAGGCAGATTGGAAATGCTGTTCCTCCTCCCCTTGCATTTGCTTTAGGGTTGAAACTCAAAGAAGCAGTGGACAGAACATAG 4662 0.4166 MGSASLLNSSDSSQQGVKDNNSIEEPVASNTQEEVMAGGKQKKRGLSESSEQPAPTRKMPKRSVSAARKNLKEQTFSISDKSSLIETKQDQIVEEEFLAVRMTAGQDDGRPNRRLTDFILHDETGAAQPLEMLEINDLFITGLILPLEGSVDKKKEEGVRCEGFGRIESWDISGYEDGSPVIWISTDIADYDCQKAAASYKKYYDHFFEKARACLEVYKKLAKSSGGDPDISLDELLAGMARSMSGSKYFSGTASLKEFIISQGEFIYKQLIGLELKPNDKGFEDIPALIALREESNKQANFASAQVMPSNATLRIGSGTAGEEKKNHMDSVDEEDEDAKLARLLQEEEDWKSRKQRKNPRSSSSSNKFYIKINEDEIANDYPLPAYYKTSLQETDEFIVFDNDYDVYDIEDLPRSMLHNWALYNSDSRLISLELLPMKPCSEIDVTIFGSGLMTADDGSGFNLDTEAGQSSSASGAQATDGIPIYLSAIKEWMIEFGSSMVFISIRTDMAWYRLGKPSKQYTPWYDTVLKTARIAISIITLLKEQSRVSRLSFADVIKKLSEYKQDHKSYISTDQMAVERYIVVHGQIILQLFAEFPDDKIRKSAFVIGLAKKMEERHHTKWLVKKKKVMPRSEPNLNPRAAMAPVVSKRKAMQATTTKLINRIWGEYYSNHLPEDLKEGTNSEVKDDDEVDEQEQEENEDADADEEETVLLEGTQKPHSVSKETKAFSDEREIRWEGDPEGKTSSGCLLYKQAIIHGEVVSVGISVSVEVDESDELPDIYYIEYMFEAKNGRKMFHGRMMQHGCQTVLGNAANEREVFLTNECRDLGLQDVKQTNVVSIQKMPWGHHYRKDNIVADKLDRERAEERKKKGLSTEYYCKSLYWPERGAFFSLPFDKLGLGSGFCQSCKLEEAEKEKQIFKVNSSKSSFVLEGTEYSLNDYVYVSPFEFEERIEQGTHKSGRNVGLKAYVVCQVLEIIVKKETKQAEIKSTELKVRRFFRPEDVSSEKAYCSDVQEVYYSDETYTISVQSIEGRCEVRKKIDVPEGCAPGGIFHNVFFCEHLYDPATGSLKKLPANIKVKYSSGHTAEAAARKKKGKCREGDSISEPDLERKTSNDKRLSTLDIFAGCGGLSEGLHQSGVSSTKWAIEYEAPAGNAFKANHPEALVFIDNCNVILRAIMEKCGDIEDCISTTEAAELASKLDEKDLSSLPLPGQVDFINGGPPCQGFSGMNRFNTSTWSKVQCEMILAFLSFADYFRPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPEDVLPEWPEPMHVFSAPELKIKLSENVQYAAVRSTANGAPLRAITVRDTIGELPAVGNGASRTNMEYQSDPVSWFQKQIRGNMAVLTDHISKEMNELNLIRCQKIPKKPGCDWRDLPDEKIKLSNGQLVDLIPWCLPNTAKRHNQWKGLFGRLDWQGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDCYQFSGNIIHKHRQIGNAVPPPLAFALGLKLKEAVDRT* 1554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5027 1553 ProSitePatterns C-5 cytosine-specific DNA methylases active site. 1216 1228 IPR018117 -
Tpr2g5027 1553 Pfam C-5 cytosine-specific DNA methylase 1120 1547 IPR001525 GO:0008168
Tpr2g5027 1553 Gene3D Vaccinia Virus protein VP39 1124 1327 IPR029063 -
Tpr2g5027 1553 CDD BAH_DCM_I 773 895 - -
Tpr2g5027 1553 SMART BAH_4 934 1074 IPR001025 GO:0003682
Tpr2g5027 1553 SMART BAH_4 760 894 IPR001025 GO:0003682
Tpr2g5027 1553 MobiDBLite consensus disorder prediction 321 338 - -
Tpr2g5027 1553 PRINTS Cytosine-specific DNA methyltransferase signature 1120 1136 IPR001525 GO:0008168
Tpr2g5027 1553 PRINTS Cytosine-specific DNA methyltransferase signature 1257 1271 IPR001525 GO:0008168
Tpr2g5027 1553 PRINTS Cytosine-specific DNA methyltransferase signature 1303 1316 IPR001525 GO:0008168
Tpr2g5027 1553 MobiDBLite consensus disorder prediction 677 708 - -
Tpr2g5027 1553 PANTHER CYTOSINE-SPECIFIC METHYLTRANSFERASE 231 1551 - -
Tpr2g5027 1553 Pfam Cytosine specific DNA methyltransferase replication foci domain 108 240 IPR022702 -
Tpr2g5027 1553 Pfam Cytosine specific DNA methyltransferase replication foci domain 411 563 IPR022702 -
Tpr2g5027 1553 ProSitePatterns C-5 cytosine-specific DNA methylases C-terminal signature. 1528 1546 IPR031303 -
Tpr2g5027 1553 ProSiteProfiles BAH domain profile. 934 1074 IPR001025 GO:0003682
Tpr2g5027 1553 Gene3D DNA Methylase, subunit A, domain 2 1369 1445 - -
Tpr2g5027 1553 Gene3D DNA Methylase, subunit A, domain 2 1446 1514 - -
Tpr2g5027 1553 CDD BAH_plantDCM_II 929 1131 - -
Tpr2g5027 1553 TIGRFAM dcm: DNA (cytosine-5-)-methyltransferase 1122 1543 IPR001525 GO:0008168
Tpr2g5027 1553 Gene3D - 910 1123 IPR043151 -
Tpr2g5027 1553 Pfam BAH domain 935 1074 IPR001025 GO:0003682
Tpr2g5027 1553 Pfam BAH domain 761 894 IPR001025 GO:0003682
Tpr2g5027 1553 MobiDBLite consensus disorder prediction 687 708 - -
Tpr2g5027 1553 MobiDBLite consensus disorder prediction 316 338 - -
Tpr2g5027 1553 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1120 1548 IPR029063 -
Tpr2g5027 1553 PANTHER DNA (CYTOSINE-5)-METHYLTRANSFERASE 1B 231 1551 - -
Tpr2g5027 1553 ProSiteProfiles C-5 cytosine-specific DNA methylase (Dnmt) domain profile. 1119 1553 IPR001525 GO:0008168
Tpr2g5027 1553 PIRSF DNMT1 958 1448 IPR017198 GO:0003886|GO:0005634|GO:0090116
Tpr2g5027 1553 PIRSF DNMT1 690 967 IPR017198 GO:0003886|GO:0005634|GO:0090116
Tpr2g5027 1553 PIRSF DNMT1 290 694 IPR017198 GO:0003886|GO:0005634|GO:0090116
Tpr2g5027 1553 PIRSF DNMT1 8 214 IPR017198 GO:0003886|GO:0005634|GO:0090116
Tpr2g5027 1553 PIRSF DNMT1 1444 1553 IPR017198 GO:0003886|GO:0005634|GO:0090116
Tpr2g5027 1553 Gene3D Vaccinia Virus protein VP39 1515 1545 IPR029063 -
Tpr2g5027 1553 Gene3D - 727 909 IPR043151 -
Tpr2g5027 1553 MobiDBLite consensus disorder prediction 1 68 - -
Tpr2g5027 1553 ProSiteProfiles BAH domain profile. 760 894 IPR001025 GO:0003682
Tpr2g5027 1553 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5027 Tpr-Chr2 56093921 56103271 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5027 K00558 - gmx:100797667 2524.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5027 2 56093921 56103271 Tpr2g5027 2 56093921 56103271 ECH