Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5015 ATGGCAGTCCCAGTTATTGATTTCTCTAAGCTGAATGGTGAAGAAAGGGCCAAAACTATGGCACTTATTGCTAATGGCTGTGAAGAATGGGGATTCTTTCAGTTGATCAATCACGGCATTCCGGAGGAACTTCTTGAAAGGGTGAAGAAGGTTTCCACTGAGTTCTATAAGCTGGAAAGAGAGGAGAATTTCAAGAACTCCACAACAGTGAAGCGTCTGAACGATATAGCTGAAAAGAAGAGCGATGAAAAGCTGGAGAATGTAGACTGGGAGGATGTTATCACTCTCCTGGATGATAACGAATGGCCAGAAAATACACCAAGTTTCAGGGAAACCATGTTAGAATATCGGTCTGAGTTAAAGAAACTAGCAGAGAGTCTCACAGAAGTGATGGATGAGAATCTGGGCTTACCAAAAGGATACATCAAGAAGGCGCTGAATGGTGGAGAAGAAGACAATGCTTTCTTTGGCACTAAGGTCAGCCACTACCCACCCTGCCCCTATCCAGAACTTGTGAACGGACTACGAGCTCACACTGATGCAGGAGGTGTCATCCTTCTGTTCCAAGATGATAAGGTTGGTGGCCTTCAAATGCTCAAAGATGGGGAATGGCTTGATGTCCAGCCTTTGCCAAATGCCATTGTCATCAACACTGGTGATCAGATTGAGGTCCTGAGCAATGGCAGATACAAAAGTTGTTGGCACAGGGTTCTGGGCTCTACAGATGGGATGAGGAGATCAATTGCATCCTTCTATAACCCACCACTCAAGGCCACCATAAGTCCTGCACCACAATTGGCAGAAAAAGAAAACCAGCAAGTCGATGACACTTATCCTAAATTTGTTTTCGGTGACTACATGTCTGTCTATGCTGAGCAGAAGTTCCTCCCTAAGGAACCAAGGTTTAGAGCTGTTAAAGCCATTTGA 927 0.4488 MAVPVIDFSKLNGEERAKTMALIANGCEEWGFFQLINHGIPEELLERVKKVSTEFYKLEREENFKNSTTVKRLNDIAEKKSDEKLENVDWEDVITLLDDNEWPENTPSFRETMLEYRSELKKLAESLTEVMDENLGLPKGYIKKALNGGEEDNAFFGTKVSHYPPCPYPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKDGEWLDVQPLPNAIVINTGDQIEVLSNGRYKSCWHRVLGSTDGMRRSIASFYNPPLKATISPAPQLAEKENQQVDDTYPKFVFGDYMSVYAEQKFLPKEPRFRAVKAI* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5015 308 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 2 305 - -
Tpr2g5015 308 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 2 305 - -
Tpr2g5015 308 Pfam non-haem dioxygenase in morphine synthesis N-terminal 3 106 IPR026992 -
Tpr2g5015 308 Gene3D - 2 308 IPR027443 -
Tpr2g5015 308 Pfam 2OG-Fe(II) oxygenase superfamily 161 254 IPR044861 -
Tpr2g5015 308 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 154 254 IPR005123 -
Tpr2g5015 308 SUPERFAMILY Clavaminate synthase-like 2 303 - -
Tpr2g5015 308 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5015 Tpr-Chr2 55974913 55976791 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g5015 1 271 Glycosyltransferase AT5G59530 32.862 1.30e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5015 K05933 - gmx:100790622 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5015 2 55974913 55976791 Tpr2g5015 2 55974913 55976791 ECH