Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g5006 ATGATTGCACAACACTTCTGCATAGTGTTGCTGTTGTTGCTAGCCTTTCCATTACTATGGGCCACTGAAGATTATTCTTCTTCCACCACCACCAGCGACAGCATCATCTTCACCACACTTGGCAGAGCTTTCTACGCTTTCGATATCTATTCTCTCCCAATTCACAACCCTCACAATGAATTACAACTCACTGACGGCCACTCCGTCAATTTTAACGGCCACTTCATTTCCAATCACGCATCCATCAAACTCCCCACAGACCAAAACCCACCTCCTCTGCAACTCGTTTACGTCACAGAGAGAAACGGTTTTCCAACCATATACTACGACGCCGTTTACACAGAATCAGAAAAAGATATCACTAACAGAATTCAACTTCCTCTGTTACAAACAGAGTCTGAGTCTCAAGTTTCGATCAAAGATAAACCAACTTTAACTACCGATGGTGAATATTTAATCTACGTGTCAACACACGAGAATCCTCGCGTGCCACGTGTAAGCTGGACGGCCGTTTATTCAACTCATCTGAAAACAGGTAAAACTAAAAGACTCACTCCTTACGGCGTCGCTGATTTCAGCCCCGCCGTATCTCCGTCTGGAAAATGGACTGCTGTCGCTTCCTACGGCGGACAAGGTTGGTCCGGCGAAGTAGAGGATCTCACTACAGATATCTATGTTTTCCTTACTAAAGACGGAACTCAACGATACAAGGTGGTTGAGCACGGTGGCTGGCCATCTTGGATCGACGATCGGACTATTTACTTTCACCGGAGAGGTAATGATGGTTGGTGGAGTATTTACAGAGTGATTCTTAGCGCTGATTCTATTTCTTCTGACTCGGTTATCATCGAACGAGTCACACCACCGGGTTTACATGCTTTCACACCCGCAACCTCGCCAGGAAATAATAAATTCATCGCCGTTGCGACGAGAAGAGCTGATTCTAGTTTCCGTCACATTGAATTGTTTGATCTGGTTAACAACGAGTTCAAGGAGTTAACTCGTTTGGTCTCGCCTAACGTTCATCATCTCAACCCGTTTATATCACCCGATTCAACTCGGGTCGGGTATCATAAGTGTAGGGGAAAGGAAAGTAGTAATAGTAGTCCCCAGTTCTTGCTAGAGAATGTTCAGAGCCCCGTTCCAAATTTAACTCTCTTCCAGTTCACCGGTTCGTTTCCGGTTTTTTCACCATCCGGAGACCAAATTGCTTATGTTGAGATGCCTGGGGTTTATGTTATGAACCGGGACGGTTCAAACCGGCGTAAGGTTTCTGATTCAATGGCATTCTCGACTGCCTGGGACCGGGTTCGACCCGGTGTAATCTACACTGCAGTTGGAGAAACATTTGCTTCGGAGAGCACGCAGGTTGATATCATATCAATTGATGTTGATCGGAACATTGTTAAAAAGTTGACTCATGACGGAAAGAACAATGCATTTCCGTCACAATCGCCTGACGGAAAACGGATTGTGTTCCGTTCAGGTCGAACGGGGCATAAGAATCTTTACATAATGGATTCAGTTGGCGGAGAGAAAAGCGGACTTAGAAGGTTAACAGAGGGTCCATGGACGGATACAATGTGCAACTGGTCCCCTAATGGAGAATGGATCGCTTTTGCATCGGATCGTCATGACCCGGGGAGTGGAAGCTTCGAGATTTACCTGATCCACCCGAATGGAACTGGCTTGAGGAAACTGATTCAAAGTGGATCGGGTGGTAGAACGAACCACCCGTATTTTAGTCCTGATGGAAAGAGCATTGTGTTTACGTCAGACTATGCTGGTATATCAGCTGAACCGATTTCAAACCCGCATGCTTACCAACCTTACGGTGAAATATTTACCGTTAGGTTGGATGGTTCAGGTTTGACAAGATTGACACATAATTCATATGAAGATGGAACTCCTGCTTGGTCTCCCAAATATATCAAGCCAGTAAATGTTGAGAGGCCTAAGGGTGGACCTTATTGTTCTTTTGATGATCTTCATTGGCTCGACAACATACCAAATTACATTGTCGGTACAGGGCTACATGCACAGTGTGGTATGTAA 2055 0.4535 MIAQHFCIVLLLLLAFPLLWATEDYSSSTTTSDSIIFTTLGRAFYAFDIYSLPIHNPHNELQLTDGHSVNFNGHFISNHASIKLPTDQNPPPLQLVYVTERNGFPTIYYDAVYTESEKDITNRIQLPLLQTESESQVSIKDKPTLTTDGEYLIYVSTHENPRVPRVSWTAVYSTHLKTGKTKRLTPYGVADFSPAVSPSGKWTAVASYGGQGWSGEVEDLTTDIYVFLTKDGTQRYKVVEHGGWPSWIDDRTIYFHRRGNDGWWSIYRVILSADSISSDSVIIERVTPPGLHAFTPATSPGNNKFIAVATRRADSSFRHIELFDLVNNEFKELTRLVSPNVHHLNPFISPDSTRVGYHKCRGKESSNSSPQFLLENVQSPVPNLTLFQFTGSFPVFSPSGDQIAYVEMPGVYVMNRDGSNRRKVSDSMAFSTAWDRVRPGVIYTAVGETFASESTQVDIISIDVDRNIVKKLTHDGKNNAFPSQSPDGKRIVFRSGRTGHKNLYIMDSVGGEKSGLRRLTEGPWTDTMCNWSPNGEWIAFASDRHDPGSGSFEIYLIHPNGTGLRKLIQSGSGGRTNHPYFSPDGKSIVFTSDYAGISAEPISNPHAYQPYGEIFTVRLDGSGLTRLTHNSYEDGTPAWSPKYIKPVNVERPKGGPYCSFDDLHWLDNIPNYIVGTGLHAQCGM* 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g5006 684 SUPERFAMILY DPP6 N-terminal domain-like 144 426 - -
Tpr2g5006 684 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 32 662 - -
Tpr2g5006 684 Gene3D - 548 651 IPR011042 -
Tpr2g5006 684 Gene3D - 90 249 IPR011042 -
Tpr2g5006 684 Gene3D - 250 443 IPR011042 -
Tpr2g5006 684 Gene3D - 444 547 IPR011042 -
Tpr2g5006 684 PANTHER DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN 32 662 - -
Tpr2g5006 684 SUPERFAMILY Tricorn protease N-terminal domain 392 641 - -
Tpr2g5006 684 Pfam WD40-like Beta Propeller Repeat 576 593 IPR011659 -
Tpr2g5006 684 Pfam WD40-like Beta Propeller Repeat 517 555 IPR011659 -
Tpr2g5006 684 Pfam WD40-like Beta Propeller Repeat 470 505 IPR011659 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g5006 Tpr-Chr2 55858695 55865391 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g5006 - - mtr:MTR_3g088425 1181.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g5006 2 55858695 55865391 Tpr2g5006 2 55858695 55865391 ECH