Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4994 ATGGGAGATTGGTGGTGGTGGCGGTGTTCTTTTTTATTAGTTTCACTGATTTTAACAGCATCTCTTGGCACCATCCATGGTGGCAATGTCACCTACGACAGAACATCATTAGTCATTAATGGCCAACATAAAATCCTCTTCTCCGGTTCAATTCATTATCCTCGTAGCACTCCTCAGATGTGGCCTAACTTAATTGCCAAAGCCAAGGAAGGGGGATTAGATGTCATACAAACTTATGTATTTTGGAATCTTCATGAGCCTCATCAAGGCCAGTATGAGTTTAGTGGAAGGTTTGATTTAGTGGGATTCATTAAAGAAATTCAAGCACAAGGTTTATATGTGTCACTTAGAATTGGACCTTACATTGAGAGTGAATGCACTTATGGGGGTCTACCATTATGGTTACATGATATTCCAGGAATTGTATTTAGATCTGATAATGATCAATTCAAGTTTCACATGCAAAGATTCACAACCAAAATAGTCAACCTAATGAAATCAGCCAAACTTTTTGCTTCACAAGGAGGACCTATCATACTATCTCAGATTGAGAATGAATATGGTAACGTCGAAAGGGGGTTTCAACAGAAAGGATTCAGCTATGTTCGTTGGGCGGCTCAAATGGCCGTGGGACTCCAAACGGGTGTACCTTGGGTAATGTGTAAACAAGATGATGCTCCTGACCCTGTGATCAACACATGCAATGGCATGCAATGCGGGAAAACATTTAACGGGCCAAACTCGCCTAACAAGCCTTCATTATGGACAGAGAATTGGACTAGTTTTTATCAATTCTTTGGTGGAGTACCATACCTGAGATCAGCTTCAGACATTGCCTACAATGTTGCCTTGTTCATTATTGCAAAGAAAGGAAGCTATGTGAATTACTACATGTACCATGGAGGAACCAATTTTGATAGATTGGCCTCCCCTTTCATAACAACAGCTTATTATGATGAGGCTCCACTAGACGAATATGGTTTGGTAAGGCAACCAAAATGGGGACATCTTAAGGAGCTACATGCTGCAATCAAGTCATGTTCACAACCTCTTCTTTATGGAACTCAAACCACTTTCAACTTAGGCTTACAACAAAAAGCTTATGTTTTCAGAAGCTCCACAGAATGTGCTGCCTTCTTGGAAAATAGTGGACCTAGGGATGTCACAATTAAATTTCTAAATATTCCGTATCAATTGACCCGAAAATCAATCAGTATTCTACCAGGCTGCAAGAATGTAGCATTCAATACTGGCAAGGTGACTATACAGAACAGTATCAGAGAAATGAAACCGCAGTTTCGGTTTAATTCAGCTGAAAAATGGAAAGTGTATACAGAAGCCATCCCTAATTTTGACGATACGTCATTAAGAGCAAATAGATTATTAGATCAAATCGCCACAGCAAAAGATACATCTGATTACATGTGGTACACTTTCAGGCTTAATCACAACTCTCCTAATGCTCAATCTGTTCTTAGTATATACAGCCTAGGACATGTTTTGCATTCGTTCGTCAATGGAGTCTTAACAGGTTCTGCACATGGAAGTCACAACTATACGTCTGTTGCAATGGAAAAAAATGTTAATCTGGTAAATGGGATGAACAACATCTCCATACTAAGTGCAACAGTTGGATTGCCGAACTCGGGAGCATATTTAGAGCGCAAAGTTGCTGGTTTGAGTAAAGTGAAAGTTCAAAGAAGAGATTTCACTAATTACTCATGGGGATATCAGGTTGGGTTGTTGGGAGAAAAATTGCAAATCTATACAGTCAGTGGATTAAGTAAAGTTCAGTGGAAAAGTTTTCAAAGCTCTACTAAACCACTAACATGGTATCAGACCACATTTGATGCACCAGAAGGTAACAAACCTGTAGTGCTTAACCTTGGTTCCATGGGAAAGGGACTTGCTTGGGTTAATGGCCAAGGTATTGGTCGATATTGGGTATCTTTCCACACTCCACGGGGGACTCCTTCTCAACAATGGTATCACATACCCCGTTCCTTCCTAAAAGCTACCGGGAACCTACTTGTTATACTAGAAGAAGAAACTGGAAATCCTTTAGGAATCACTCTAGACACAGTATACATCACGAATTGA 2100 0.4005 MGDWWWWRCSFLLVSLILTASLGTIHGGNVTYDRTSLVINGQHKILFSGSIHYPRSTPQMWPNLIAKAKEGGLDVIQTYVFWNLHEPHQGQYEFSGRFDLVGFIKEIQAQGLYVSLRIGPYIESECTYGGLPLWLHDIPGIVFRSDNDQFKFHMQRFTTKIVNLMKSAKLFASQGGPIILSQIENEYGNVERGFQQKGFSYVRWAAQMAVGLQTGVPWVMCKQDDAPDPVINTCNGMQCGKTFNGPNSPNKPSLWTENWTSFYQFFGGVPYLRSASDIAYNVALFIIAKKGSYVNYYMYHGGTNFDRLASPFITTAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSCSQPLLYGTQTTFNLGLQQKAYVFRSSTECAAFLENSGPRDVTIKFLNIPYQLTRKSISILPGCKNVAFNTGKVTIQNSIREMKPQFRFNSAEKWKVYTEAIPNFDDTSLRANRLLDQIATAKDTSDYMWYTFRLNHNSPNAQSVLSIYSLGHVLHSFVNGVLTGSAHGSHNYTSVAMEKNVNLVNGMNNISILSATVGLPNSGAYLERKVAGLSKVKVQRRDFTNYSWGYQVGLLGEKLQIYTVSGLSKVQWKSFQSSTKPLTWYQTTFDAPEGNKPVVLNLGSMGKGLAWVNGQGIGRYWVSFHTPRGTPSQQWYHIPRSFLKATGNLLVILEEETGNPLGITLDTVYITN* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4994 699 Gene3D - 438 575 - -
Tpr2g4994 699 PANTHER BETA-GALACTOSIDASE 11 698 - -
Tpr2g4994 699 SUPERFAMILY Galactose-binding domain-like 404 556 IPR008979 -
Tpr2g4994 699 PANTHER BETA-GALACTOSIDASE RELATED 11 698 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 Gene3D - 583 697 - -
Tpr2g4994 699 SUPERFAMILY Galactose-binding domain-like 572 696 IPR008979 -
Tpr2g4994 699 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Tpr2g4994 699 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 PRINTS Glycosyl hydrolase family 35 signature 254 269 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 PRINTS Glycosyl hydrolase family 35 signature 292 307 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 PRINTS Glycosyl hydrolase family 35 signature 311 327 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 PRINTS Glycosyl hydrolase family 35 signature 607 621 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 PRINTS Glycosyl hydrolase family 35 signature 634 650 IPR001944 GO:0004553|GO:0005975
Tpr2g4994 699 Pfam Beta-sandwich domain in beta galactosidase 351 420 IPR041392 -
Tpr2g4994 699 Gene3D Glycosidases 27 348 - -
Tpr2g4994 699 SUPERFAMILY (Trans)glycosidases 26 347 IPR017853 -
Tpr2g4994 699 Pfam Glycosyl hydrolases family 35 36 343 IPR031330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4994 Tpr-Chr2 55729977 55737766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4994 1 698 Glycoside Hydrolase AT5G63800 58.982 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4994 - - pvu:PHAVU_009G127500g 1179.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4994 2 55729977 55737766 Tpr2g4994 2 55729977 55737766 ECH