Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4972 ATGGCACAAACTATGTTACTCATGTCTAGTGTCTCTAGTACTTATTCCGTGGAATTGAAGAAAGATCCTTTGCTTCAATTACAGTGTCAAAGATTGAGGCCTAGAATCTCTGATGTTTCATTCAACCCACTTTCTTCGAATTCTAAGCGTTTATCATCTCGTACATTCACAACTCTTGCTCTATTCAAATCAAAAACCAAAGCCCCTGCTAAGGTTGTAAAGTCAAAACCAAAGGTTGAAGATGGTATCTTTGGAACTTCTGGAGGATTTGGTTTCACTAAGCAGAATGAACTATTTGTGGGTCGTGTTGCTATGATTGGTTTTGCAGCATCAATATTGGGTGAAGCATTAACTGGCAAAGGAATTCTAGCACAATTGAATTTGGAAACTGGAATTCCAATTTATGAAGCAGAGCCACTTCTCCTTTTTTTCATTATCTTCACTCTTCTAGGAGCCATTGGAGCTCTTGGTGACCGTGGTAAATTTGTTGATGATGAACCAACTACTGGTGGTGTTATTCCTCCTGGAAAAGGCTTTAGAGCTGCTCTTGGTCTCAGAGAAGGAGGTCCTTTATTTGGATTCACAAAATCCAATGAATTGTTTGTTGGAAGATTGGCTCAATTGGGTTTTGTTTTCTCATTGATTGGAGAAATTATTACTGGGAAGGGAGCTCTAGCTCAGCTCAACATTGAAACTGGGGTACCAATTACTGAAATTGAACCACTAGTCTTGTTCAATGTTATTTTCTTCTTCGTTGCTGCTTTGAATCCTGGAACTGGAACATTTGTAAAAGATGAAGACGAAGATTAG 810 0.3877 MAQTMLLMSSVSSTYSVELKKDPLLQLQCQRLRPRISDVSFNPLSSNSKRLSSRTFTTLALFKSKTKAPAKVVKSKPKVEDGIFGTSGGFGFTKQNELFVGRVAMIGFAASILGEALTGKGILAQLNLETGIPIYEAEPLLLFFIIFTLLGAIGALGDRGKFVDDEPTTGGVIPPGKGFRAALGLREGGPLFGFTKSNELFVGRLAQLGFVFSLIGEIITGKGALAQLNIETGVPITEIEPLVLFNVIFFFVAALNPGTGTFVKDEDED* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4972 269 Gene3D Chlorophyll a/b binding protein domain 55 240 - -
Tpr2g4972 269 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 1 178 - -
Tpr2g4972 269 PANTHER PHOTOSYSTEM II 22 KDA PROTEIN, CHLOROPLASTIC 192 254 - -
Tpr2g4972 269 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 1 178 - -
Tpr2g4972 269 PANTHER UPF0041 BRAIN PROTEIN 44-RELATED 192 254 - -
Tpr2g4972 269 SUPERFAMILY Chlorophyll a-b binding protein 62 247 - -
Tpr2g4972 269 Pfam Chlorophyll A-B binding protein 78 214 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4972 Tpr-Chr2 55501962 55504458 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4972 K03542 - gmx:100807355 406.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4972 2 55501962 55504458 Tpr2g4972 2 55501962 55504458 ECH