Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4968 ATGAACGCTTACATTATCGGTTTCGTTGTTCCACTCGTCATATACCTTTTCAAAAATGCCAAATCTCGTAAACGCCGTGGTTTACCCGCCGACGTCGCCGGCGATCCCGGTTTCGCGGTCCGCAACCACCGTGTCACTTCTCCAATGACATCTGCCTGGGAAGGGGTAACGACTCTCGTAGAGCTTTTCGAGCGTGCATGCAGAGAGCATCATCATAGATTGTTACTAGGAACGCGTGAATTGATTTCGAGAGAGATTGAAACTTCTTCCGATGGAAGAAGCTTCGAGAAGCTTCATCTTGGAGAATATAAATGGATTACGTATGGAACGGTTTTTGAATCTGTTACTAGTTTTGCTTCTGGTTTGGCTAAACTTGGTCATGTTAGAGAAGAACGTGCTGCGATTTTTGCTGAAACTAGAGAAGAATGGTTTATTGCATTGCAGGCTTGTTTCAGGAGAAATGTGACTGTTGTGACAATATATGCTTCGTTGGGAGAGGAAGCTTTGTGTCACTCATTGAATGAGACAGAGGTTGCGACTGTGATTTGTGGGCGCAAAGAATTGAAATCACTTGTAAATATTGCCGGACAACTTGACTCTGTGAAACGTGTGATATGTATTGACAATGATGTCCCATCTGATGCCTCATCTGCTCAGCATAGATGGACAATCACTTCCTTTTCTGATGTCGAGAAGCTTGGTAGAGAAAATCCCATTGAGGCTGATTTACCCCTTTCTGCTGATGTTGCAGTTATAATGTACACAAGCGGAAGTACAGGCTTGCCTAAGGGTGTGATGATGACTCATGGCAATATCTTAGCAACAGTGTCTGCTGTAATGACAATTGTTCCTAACCTTGGGCCAAAGGATGTATATCTAGCATACTTACCAATGGCTCATATCCTTGAATTAATAGCTGAGAATTTGATTGCATCTGTTGGAGGCTGTATAGGATACGGAACTCCTTTGACTCTAACTGATACATCAAACAAGGTAAAAAAGGGGACAAAGGGGGATGCCAGTGCATTGAGTCCAACTGTGATGGCAGCTGTACCAGCAATTCTTGATCGTGTACGCGATGGAGTTTTCAAGAAGGTAAATGCAAAGGGAGGATTATCAAAGCAGTTGTTTGATTTAGCCTATACACGAAGGTTGAAGGCGATCAATGGTAGCTGGTTTGGTGCTTGGGGCTTGGAAAAGTTTCTATGGAATTTTCTTGTTTTCAAAAAGATCCAAGCAATTCTCGGTGGTCGTATTCGTTTTATACTATGCGGCGGTGCACCCCTTTCTGGTGATACACAAAGATTCATCAATATTTGTCTTGGTGCTCCAATAGGTCAAGGATATGGTCTCACGGAGACTTGTGCTGGTGGGTCATTCTCTGATTTTGACGATACATCTGTTGGCCGTGTTGGACCACCTATTCCTTGTTCATATATTAAGCTAATCGACTGGCCTGAAGGTGGATATTCAACTACTGACTCACCGATGCCTCGTGGTGAAATAGTAATTGGTGGTCCAAATATCACTCTTGGGTATTTCAAAAATGAAGAAAAGACAAGAGAATCTTACAAGGTTGATGAACGGGGAATAAGGTGGTTCTACACTGGTGACGTAGGGAGATTTCATGCAGATGGTTGCCTTGAGATCATTGATAGGAAAAAGGACATAGTTAAACTGCAACATGGAGAATATGTGTCCTTAGGAAAGGTTGAGGCAGCTATTCTTGGAAGCCCCTTCGTAGACAACATTATGTTATATGCTGATTCTTTTCAAAGTTACTGTGTGGCACTTGTGGCTGTTTCTCGTCCCGCGTTGGAAGAATGGGCATCAAAGCAAGGGATTGCTTATTCTGATATTTCAGAACTGTGCGGAAAAGAAGAAGCAGTGAAGGAGGTGCATGCATCACTTGTAAAGGAAGCAAAAAAGGCTCGTCTGGAAAAATTTGAGATTCCTGCAAAAATTAAATTACTTTCCGACCCGTGGACTCCCGAGACTGGTCTAGTCACTGCAGCTCTTAAGATCAAGAGAGATATCATTAGAAAGACTTTTCAAGAAGAACTCTCAAAGTTATATGGCAAATAG 2085 0.4273 MNAYIIGFVVPLVIYLFKNAKSRKRRGLPADVAGDPGFAVRNHRVTSPMTSAWEGVTTLVELFERACREHHHRLLLGTRELISREIETSSDGRSFEKLHLGEYKWITYGTVFESVTSFASGLAKLGHVREERAAIFAETREEWFIALQACFRRNVTVVTIYASLGEEALCHSLNETEVATVICGRKELKSLVNIAGQLDSVKRVICIDNDVPSDASSAQHRWTITSFSDVEKLGRENPIEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNILATVSAVMTIVPNLGPKDVYLAYLPMAHILELIAENLIASVGGCIGYGTPLTLTDTSNKVKKGTKGDASALSPTVMAAVPAILDRVRDGVFKKVNAKGGLSKQLFDLAYTRRLKAINGSWFGAWGLEKFLWNFLVFKKIQAILGGRIRFILCGGAPLSGDTQRFINICLGAPIGQGYGLTETCAGGSFSDFDDTSVGRVGPPIPCSYIKLIDWPEGGYSTTDSPMPRGEIVIGGPNITLGYFKNEEKTRESYKVDERGIRWFYTGDVGRFHADGCLEIIDRKKDIVKLQHGEYVSLGKVEAAILGSPFVDNIMLYADSFQSYCVALVAVSRPALEEWASKQGIAYSDISELCGKEEAVKEVHASLVKEAKKARLEKFEIPAKIKLLSDPWTPETGLVTAALKIKRDIIRKTFQEELSKLYGK* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4968 694 ProSitePatterns Putative AMP-binding domain signature. 252 263 IPR020845 -
Tpr2g4968 694 Gene3D - 46 553 IPR042099 -
Tpr2g4968 694 SUPERFAMILY Acetyl-CoA synthetase-like 54 692 - -
Tpr2g4968 694 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 694 - -
Tpr2g4968 694 Pfam AMP-binding enzyme 100 561 IPR000873 -
Tpr2g4968 694 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 10 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4968 Tpr-Chr2 55459354 55468273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4968 21 692 Acyl Lipid Metabolism Gene Families AT2G04350 63.852 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4968 K01897 - gmx:100778889 1213.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4968 2 55459354 55468273 Tpr2g4968 2 55459354 55468273 ECH