Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4949 ATGCTGCTTGGAAAACGTCCTCGGCCACCAGTTATGAGAAGAACAAGAAGCATGAGTGGTGGTCTATCCGTGGACATGCATACACCTGATAATCATGATCAGACAAACAACAACTTAGAACCACATCACGAGGAACAACAACAATCATCAATGATGTCTGATGTTCATAATCCCCTGCATCCACAACCAAATCATGATGATCCACATGCGGTTGTGATGACTGGACCAGCAGAATTAACGGTGACTGATGAGTGTTTAGTGGAAAGTACAGTGATGTTCCCTTCACACACAAACACAATCACAATCACTAACAATATTGTTAATCATAATAATATTCCTGTGAGTGCGAGTGCACATATCATACACAGTACACCTCACTTTCTCCGAATTTGTGGCCTCTGTAACTGTCGTTTGGCTCCCGGTCGAGACATCTACATGTATAGGGGAGATACAGCATTTTGCAGTTTGGAGTGTAGGGAGGAGCAAATGAAACAAGATAGGAGGAAAGAAAAGTGGAAAATGGGCGTTTCCAAGAAAGAAGACCACCGTGTATCACCACCGTGCACGGCCACCGCTAAAGCTTCAACTGCAACTTGTACTTGA 603 0.4378 MLLGKRPRPPVMRRTRSMSGGLSVDMHTPDNHDQTNNNLEPHHEEQQQSSMMSDVHNPLHPQPNHDDPHAVVMTGPAELTVTDECLVESTVMFPSHTNTITITNNIVNHNNIPVSASAHIIHSTPHFLRICGLCNCRLAPGRDIYMYRGDTAFCSLECREEQMKQDRRKEKWKMGVSKKEDHRVSPPCTATAKASTATCT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4949 200 MobiDBLite consensus disorder prediction 1 30 - -
Tpr2g4949 200 Pfam zinc-finger of the FCS-type, C2-C2 123 169 IPR007650 -
Tpr2g4949 200 PANTHER PROTEIN INCREASED RESISTANCE TO MYZUS PERSICAE 1 1 191 - -
Tpr2g4949 200 PANTHER FCS-LIKE ZINC FINGER 5 1 191 - -
Tpr2g4949 200 ProSiteProfiles Zinc finger FLZ-type profile. 126 170 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4949 Tpr-Chr2 55256305 55258124 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4949 - - mtr:MTR_3g087700 238.039