Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4877 ATGGGAGACATTTCACCGGAGAGAAAATCGGGTTGTGGATTGATGACAACGGTATTCGGAAGACATAGTCAACGGTCGAAAAAAGCATCCTCTACAGGATCTTCTCCCATACCACGTAGTAGAAGTGCCTCTAAAGAGGTAGTTTACGTCGATCCACCTTCACGCAACGTAGCTTCTCGTTCTGTTTCCAATTCTTCTTGTTCATCAAATAATAATAATAATCCACAGAGAAGAAACTCCAACGAAACGACAATGCCACGTGGCATGTCAAAAAATTCAAATTCATCAACTACACAGGGGTATGTTAACCAAGGTAGGAGGGTGCCAAAAGAAGTTGTTGGAATTTCAGGTGAGTTAGATACCATGATCAATGATCACCAAAAATCTAACTCGAAAGGGAGTACTTTTGTTCGCGCTTCTTCTGGCAATGTTATGTTATATGGACATTTAGGTAATCTTAGACAAGGAGCTAAAGATAATAGTTATTCAAATGCAATGGATAATTATAACCAATACTTTGAAAATGCAAATTCAAATGTTGGAGGAAACACAAAGAATGTGTCGAGTATTAATAAAGAGACACATTCCTCGACGAAGTTGAAGGGAGAAAATACGGGTGGTGGTTCACTTTGTAGGGCTATATCAACTAGAATGGATCCAGAACAGTTGAAGATAATGGGGAACGAGGATTATAAGAATGGAAGATTTGCGGAGGCATTATCTTTGTATGATGCAGCTATTGCAATTGATCCTAAAAAGGCTGCTTATAGAAGTAACAGAAGTGCTGCTTTAACTGCTCTTGGTAGGCTTCTTGAAGCTGTGTTTGAATGTAGGGAAGCTATTCAAATTGATCCTCATTATCATCGAGCTCATCATCGTTTAGGAAGTTTGCATTTTAGATTAGGAGAAACAGATAAGGCCCTTTATCATTATAAACAAGCAGGGCCAGAGGCTGATCCTGATGAAGTTGCTAAAGTGAAGATTCTTCAAGCTCATTTAAATAAGTGCACCGAGGCTCAAAGGGTAGGAGATTGGAACAAACTCGTGGTCGAGACCTCCAACACTATATCAGCTGGTGCAGATTCTGCTCCACAGATATTTGCATTGCAAGCCGAAGCCCTGATAAAACTCCGTAGGCATCAAGATGCGGACAACGTAATGTCAAAATGTCCTAATTTTGATGTTGACGATTGTACCAAGTTCTTTGGACCAATTGGTAATGCAAATTTGTTAGCAACACGAGCTCAAGTTGATCTAGCTGCTGGCAGATTTGATGATGCTTTGGAGGCAGCACATAAAGCAACTAGGCTAGACACTAACAACAAGTTAGCAAACAAGGTATTGGGAAAGGCTCGAGCCGTGACAGGTGCAAGATGTAGAGGAAACGAGCTTTTCAAGGCGTCGAAATTCTCTGAGGCTTGTAATGCATATGGAGAAGGGCTTCAGCATGATCCATATAACTCAGTTTTACTATGCAATCGAGCCGCTTGTAGATCAAAACTTGGTCAATTGGAGAAAGCAATTGAAGATTGCACCGCTGCTCTTAACTTACGCCCATCTTACACCAAAGCAAGGTTGAGAAGAGCTGATTGTAATGCTAAGTTGGAAAGATGGGAAGCTTCAATAGGAGACTATGAAATCTTGTTAAAAGAGACACCAGAAGACGAGGAAGTCAGCCGCGCATTGTCGGAGGCTCGGGTCCAAATTAAGAAACAACGAGGCGGATAA 1728 0.412 MGDISPERKSGCGLMTTVFGRHSQRSKKASSTGSSPIPRSRSASKEVVYVDPPSRNVASRSVSNSSCSSNNNNNPQRRNSNETTMPRGMSKNSNSSTTQGYVNQGRRVPKEVVGISGELDTMINDHQKSNSKGSTFVRASSGNVMLYGHLGNLRQGAKDNSYSNAMDNYNQYFENANSNVGGNTKNVSSINKETHSSTKLKGENTGGGSLCRAISTRMDPEQLKIMGNEDYKNGRFAEALSLYDAAIAIDPKKAAYRSNRSAALTALGRLLEAVFECREAIQIDPHYHRAHHRLGSLHFRLGETDKALYHYKQAGPEADPDEVAKVKILQAHLNKCTEAQRVGDWNKLVVETSNTISAGADSAPQIFALQAEALIKLRRHQDADNVMSKCPNFDVDDCTKFFGPIGNANLLATRAQVDLAAGRFDDALEAAHKATRLDTNNKLANKVLGKARAVTGARCRGNELFKASKFSEACNAYGEGLQHDPYNSVLLCNRAACRSKLGQLEKAIEDCTAALNLRPSYTKARLRRADCNAKLERWEASIGDYEILLKETPEDEEVSRALSEARVQIKKQRGG* 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4877 575 MobiDBLite consensus disorder prediction 56 104 - -
Tpr2g4877 575 ProSiteProfiles TPR repeat profile. 220 253 IPR019734 GO:0005515
Tpr2g4877 575 MobiDBLite consensus disorder prediction 17 41 - -
Tpr2g4877 575 SUPERFAMILY TPR-like 219 566 IPR011990 GO:0005515
Tpr2g4877 575 Pfam Tetratricopeptide repeat 490 521 IPR001440 GO:0005515
Tpr2g4877 575 ProSiteProfiles TPR repeat profile. 408 441 IPR019734 GO:0005515
Tpr2g4877 575 SMART tpr_5 522 555 IPR019734 GO:0005515
Tpr2g4877 575 SMART tpr_5 408 441 IPR019734 GO:0005515
Tpr2g4877 575 SMART tpr_5 254 287 IPR019734 GO:0005515
Tpr2g4877 575 SMART tpr_5 288 321 IPR019734 GO:0005515
Tpr2g4877 575 SMART tpr_5 454 487 IPR019734 GO:0005515
Tpr2g4877 575 SMART tpr_5 220 253 IPR019734 GO:0005515
Tpr2g4877 575 SMART tpr_5 488 521 IPR019734 GO:0005515
Tpr2g4877 575 Gene3D Tetratricopeptide repeat domain 218 574 IPR011990 GO:0005515
Tpr2g4877 575 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 5 573 IPR044534 -
Tpr2g4877 575 Pfam Tetratricopeptide repeat 290 320 IPR019734 GO:0005515
Tpr2g4877 575 Pfam Tetratricopeptide repeat 227 286 - -
Tpr2g4877 575 MobiDBLite consensus disorder prediction 1 108 - -
Tpr2g4877 575 PANTHER OS01G0616333 PROTEIN 5 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4877 Tpr-Chr2 54503453 54506600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4877 302 559 Glycosyltransferase AT3G04240 23.759 5.31e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4877 - - lang:109326248 709.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4877 2 54503453 54506600 Tpr2g4877 2 54503453 54506600 ECH