Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4876 ATGGATTCAGGAAATAGTGGTAGTATGCAATCTTCAAGCTGTGGTGATGAAATTGAAGAGTATGATTCATCAAAACCTGAATCGGATCAGTTGTCGATGTTTCTGAACAATCAATTATTACCTTCAACAACAACAACAACAACAAGATCAATAAGTCATTTTCTAAACCCACCACCACAATCTTCTTCTTTACAACAACAAATGTTTGATCCATTAGCAAATTATTACATGGATTCATTACAAAAATCAACACCATCAAACCAAAACTCATTTCTAAATCTTGATATGATGTGGTCTAAAGGTGCTACAGGTAGATCTGAACAAAATAGCAATGATCTTAGCAACTTAATGATACCATCATCATCTTCTCATCAAAATCAACAAGCTTTTTTGTTGAGTCAAGTGGTTGGTGAAACAAGAGAAAACATTAACGTTGTTGGTGGTTCTGTTCCTACCACACACCATTCTCAGCCATTAGATCATCATCATCGTCAACAACGTGGAACATCGCTTACCAATGATCAACAAAATCTTCAAAACATCAACAATAGCAATATGGGTAGAAACAATAATCCTAAGAAAAGATCAAGAGCTTCAAGACGTGCACCAACAACAGTTTTAACAACAGATACAACGAATTTCAGAGCTATGGTTCAAGAATTTACTGGTATACCAGCACAACCATTTTCTTCACCTTTTCCAAGAACAAGATTGGATCTTTTTGGTTCTTCAAGATCATCTTTTTCATCATCTCATATGGATTCTCTACCGCCACCGCCGCCACTCCAACCACCTTATCTTCTTCGGCCTTTTGCTCAGAAAATTCACTCTTTTCCACCTTCTTCATCCATGGTGGAAAATTTGCTAGTGTCTAATAATAATTCAACTACCATTAACTACCATTTATCTCAGCAGCATCAGAATCAGCAGAGTCATCATCCTGTAATGCAACACAACCAAATTCTCGGTTTTCAATCAATTTCTGAAACAGCAACAACAAAATATCCAATTGGGTCCCACCAACAACAAACCTCCTTGGAAATCTCGCCCAATGTTGATTCTCATATCAAAAGGGGTTCTCTTTTTGAAGAATTATCTCATCATGTTAATGTTAACAACACCAACAATATTGGTAATGTTCTTCATCGTCAGAACATGGTTCCCACATCGTCGTCGTCGGACGTGGTGGTCAACAATAATATGGGTAGTTCTTCGTCGGGGAATCAGTGGGGTACGAGAACGAATAATGGAGGAAATCTTGGGTCTTTGAGTTGCATTGAAGAAAGGAATTGTACATCAGATTTTGGTATAGAGAAAGGACAAGAATGTGCTGTGGCTACAACAAGAGGTGAAGAGTAG 1359 0.376 MDSGNSGSMQSSSCGDEIEEYDSSKPESDQLSMFLNNQLLPSTTTTTTRSISHFLNPPPQSSSLQQQMFDPLANYYMDSLQKSTPSNQNSFLNLDMMWSKGATGRSEQNSNDLSNLMIPSSSSHQNQQAFLLSQVVGETRENINVVGGSVPTTHHSQPLDHHHRQQRGTSLTNDQQNLQNINNSNMGRNNNPKKRSRASRRAPTTVLTTDTTNFRAMVQEFTGIPAQPFSSPFPRTRLDLFGSSRSSFSSSHMDSLPPPPPLQPPYLLRPFAQKIHSFPPSSSMVENLLVSNNNSTTINYHLSQQHQNQQSHHPVMQHNQILGFQSISETATTKYPIGSHQQQTSLEISPNVDSHIKRGSLFEELSHHVNVNNTNNIGNVLHRQNMVPTSSSSDVVVNNNMGSSSSGNQWGTRTNNGGNLGSLSCIEERNCTSDFGIEKGQECAVATTRGEE* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4876 452 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 415 - -
Tpr2g4876 452 Pfam VQ motif 201 228 IPR008889 -
Tpr2g4876 452 MobiDBLite consensus disorder prediction 169 192 - -
Tpr2g4876 452 MobiDBLite consensus disorder prediction 150 207 - -
Tpr2g4876 452 MobiDBLite consensus disorder prediction 1 17 - -
Tpr2g4876 452 MobiDBLite consensus disorder prediction 1 28 - -
Tpr2g4876 452 PANTHER VQ MOTIF-CONTAINING PROTEIN 1 415 IPR039609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4876 Tpr-Chr2 54481081 54483467 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4876 - - mtr:MTR_3g087390 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4876 2 54481081 54483467 Tpr2g4876 2 54481081 54483467 ECH