Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4868 ATGGATTCATCCCATATACATGCTTATGCAAACTTCAGTTGTGAACTAAAAATAATCCAAGCTCGAAATGTTGAATTCATCAAGTCTACGAAAAACTTGTTTGCAAGGTTGTATCTTCCAACAGGAAGCAACAAAAGAATTCAACTCAACAGCAAAAATGTTTCATCCAAATCAGTACCCTTTTGGGACGAATCTTTTAATCTAGATTGTTCTTGCCCACAAGAATTCTTGGAAAACCTTAATCAACAAAGCCTGGTTTTGGAGCTGAGGCAAAGGAAGATGTGGGGGTCAAAACTTATTGCGAAAAGTGAGATTCCATGGAAGGTGATTCTTGAATCACAAAACATGGAGTTGAAAAATTGGTTAAAAATGGATTTAGTTAGTGGAAGTGATTGCAAAGAGGGTATGTTCACAATACCAGAAGTGGAAGTGGAGATTAAAGTTAGAGTTGCTTCAGTTTCGGAGATGGAAAAACAGAATAAGAGAAGGTTGAATAATTGGAATGAATGTGGATGCAAAAATGGACATGATCATCAAGCTTGGTGCAACACTGAAGATTGTGATATATTTGCGCTTGGCGCAGCTTTGGAGGCTTTTTAA 600 0.3717 MDSSHIHAYANFSCELKIIQARNVEFIKSTKNLFARLYLPTGSNKRIQLNSKNVSSKSVPFWDESFNLDCSCPQEFLENLNQQSLVLELRQRKMWGSKLIAKSEIPWKVILESQNMELKNWLKMDLVSGSDCKEGMFTIPEVEVEIKVRVASVSEMEKQNKRRLNNWNECGCKNGHDHQAWCNTEDCDIFALGAALEAF* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4868 199 ProSiteProfiles C2 domain profile. 1 122 IPR000008 -
Tpr2g4868 199 SMART C2_3c 13 119 IPR000008 -
Tpr2g4868 199 CDD C2 15 123 - -
Tpr2g4868 199 PANTHER OSJNBA0006M15.15 PROTEIN 1 199 - -
Tpr2g4868 199 Gene3D C2 domain 3 139 IPR035892 -
Tpr2g4868 199 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 131 IPR035892 -
Tpr2g4868 199 Pfam C2 domain 15 117 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4868 Tpr-Chr2 54405449 54406387 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4868 - - gmx:100807677 276.174