Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4865 ATGAAAAAGAAACAATCTTTGCGTACCAAAGCCACCAACTTTGTCTCTGTCCTTCTCAACCCCATCTCTGATCCTGATTCTCATCAACCCTCAAAACACCCTCCAACTTCTTCAGAAGGAGTAGGTGAATTAAAAAAAAGTGATGAAGAGGGTAATAATAGTAATCTTGATTTAGTTGATAATGGCCCTGATACTTCATCTTTCACTGCATTTCTCTATTCTTTATTGTCTTCTTCAGACTCTAAAGAGAATGATAACTCAAATGGACATAATGATGATAAAGCTGAACCTGATAATAATAATCATAATAGCCCTTTAGTTGATTCATCCATTGAGGAAAATGGTGGTAGGAAAAGTTTGTTTTCTAGAAGTAAGCAATCAGTTGGTAGAGTTATTCGCCGAGCTGTCAGAATCCGTGGATTTCGCCATCATGATCGGAAGGATAGTAGTAATAATGTTGAGGTGAAACTTGAAGATAGGAGGAAAGAATCACTGCCTATAAAAGAGTCGTTGCCTTTGGATGATTTTCCTGGAATTTCTGAACCTTCGGTTCTTGTTTCGGAAAGTATAAGGAATGTTCTTTATGCTTCTCTTCCGCCGCTTATGCATGGAAGAAAATGGCTGTTGCTATACAGCACTTGGAGGAATGGTATATCGCTTTCAACTCTTTACCGTAGAAGCATGCTTTGGCCTGGATTGAGTTTGCTGGTTGTTGGAGATAAAAAAGGAGCTGTGTTTGGCAGCTTGGTTGAAACACCTCTCAAACCATCCAACAAGAGAAAATATCAGGGAACAAACAGTACTTATGTTTTCACAAATATATCTGGTCATCCTTTCATATATCGTCCAACAGGGGTAAACCGTTATTTCACACTTTGCAACACTGACTACATAGCAATTGGCGGGGGAGGTCATTTTGCACTTTATCTGGACGGTGATCTATTGAATGGCTCGAGTTCGGTATCAGAAACTTTCGGGAATCCTTGCCTTGCAAATTCTCAGGACTTTGAAGTGAAGGAAGTAGAGTTGTGGGGGTTTGTACAGACTTCAAGATATGAGGAAATGCTTGCATTGAGCAGAACTGAGGTGCCAGGGATCTGTCGATGGTAA 1110 0.4 MKKKQSLRTKATNFVSVLLNPISDPDSHQPSKHPPTSSEGVGELKKSDEEGNNSNLDLVDNGPDTSSFTAFLYSLLSSSDSKENDNSNGHNDDKAEPDNNNHNSPLVDSSIEENGGRKSLFSRSKQSVGRVIRRAVRIRGFRHHDRKDSSNNVEVKLEDRRKESLPIKESLPLDDFPGISEPSVLVSESIRNVLYASLPPLMHGRKWLLLYSTWRNGISLSTLYRRSMLWPGLSLLVVGDKKGAVFGSLVETPLKPSNKRKYQGTNSTYVFTNISGHPFIYRPTGVNRYFTLCNTDYIAIGGGGHFALYLDGDLLNGSSSVSETFGNPCLANSQDFEVKEVELWGFVQTSRYEEMLALSRTEVPGICRW* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4865 369 PANTHER TLD-DOMAIN NUCLEOLAR PROTEIN 1 363 - -
Tpr2g4865 369 Pfam TLD 209 346 IPR006571 -
Tpr2g4865 369 MobiDBLite consensus disorder prediction 85 99 - -
Tpr2g4865 369 SMART 109ultra 183 347 IPR006571 -
Tpr2g4865 369 MobiDBLite consensus disorder prediction 18 62 - -
Tpr2g4865 369 MobiDBLite consensus disorder prediction 18 36 - -
Tpr2g4865 369 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 363 - -
Tpr2g4865 369 ProSiteProfiles TLDc domain profile. 184 347 IPR006571 -
Tpr2g4865 369 MobiDBLite consensus disorder prediction 79 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4865 Tpr-Chr2 54349117 54352010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4865 206 350 EF-hand Containing Proteins AT5G06260 29.677 1.01e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4865 - - gmx:100804124 479.944