Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4845 ATGGCGAGTTCAGGTTACGGTGATGCAAACCAGAAGATAGACTATGTCTTCAAAGTAGTTCTAATCGGTGATTCCGCCGTCGGTAAATCTCAGATTCTAGCTCGTTTTGCTAGAAACGACTTCAGTTTGGACTCTAAAGCCACCATCGGTGTTGAGTTTCAAACTCGCACTTTGGTTATTCAACATAAGAGTGTTAAAGCTCAGATCTGGGATACTGCTGGCCAAGAACGATATAGGGCTGTTACAAGTGCATACTACAGGGGTGCTGTTGGGGCAATGCTGGTTTATGACATTACCAAACGTCCGAGCTTTGATCACATACCTAGATGGTTAGAAGAATTGCGTAACCATGCTGATAAGAATATAGTCATCATTCTTATAGGAAACAAAAGTGATCTTGAGGACCAGCGTGCTGTACCCACCGAGGATGCTAAAGAATTTGCTGAGAAAGAAGGTTTATTTTTCTTAGAGACCTCCGCACTGGAATCAACTAACGTTGAGACAGCCTTCATGACTGTTTTGACAGAAATATTTAACGTTGTCAACAAGAAGAACCTGGCTGCTGATGAGAATCAGGGAAATGGCAACTCGGCATCTCTATCTGGCAAGAAGATTATTGTTCCTGGTCCTGCACAAGAAATCCCTGCTAAGAGTAGCATGTGTTGTCAGTAA 672 0.4286 MASSGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALESTNVETAFMTVLTEIFNVVNKKNLAADENQGNGNSASLSGKKIIVPGPAQEIPAKSSMCCQ* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4845 223 SMART ras_sub_4 14 180 - -
Tpr2g4845 223 TIGRFAM small_GTP: small GTP-binding protein domain 16 173 IPR005225 GO:0005525
Tpr2g4845 223 SMART arf_sub_2 2 182 - -
Tpr2g4845 223 SMART rho_sub_3 19 176 IPR001806 GO:0003924|GO:0005525
Tpr2g4845 223 Gene3D - 9 218 IPR027417 -
Tpr2g4845 223 ProSiteProfiles small GTPase Rho family profile. 10 181 - -
Tpr2g4845 223 ProSiteProfiles small GTPase Rab1 family profile. 12 222 - -
Tpr2g4845 223 SMART rab_sub_5 17 180 - -
Tpr2g4845 223 SMART ran_sub_2 22 220 - -
Tpr2g4845 223 PANTHER RAB GTPASE-LIKE PROTEIN A1D 2 222 - -
Tpr2g4845 223 Pfam Ras family 18 177 IPR001806 GO:0003924|GO:0005525
Tpr2g4845 223 ProSiteProfiles small GTPase Ras family profile. 9 220 IPR001806 GO:0003924|GO:0005525
Tpr2g4845 223 PANTHER - 2 222 - -
Tpr2g4845 223 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 185 IPR027417 -
Tpr2g4845 223 CDD Rab11_like 14 178 - -
Tpr2g4845 223 PRINTS Transforming protein P21 ras signature 17 38 - -
Tpr2g4845 223 PRINTS Transforming protein P21 ras signature 40 56 - -
Tpr2g4845 223 PRINTS Transforming protein P21 ras signature 58 80 - -
Tpr2g4845 223 PRINTS Transforming protein P21 ras signature 120 133 - -
Tpr2g4845 223 PRINTS Transforming protein P21 ras signature 155 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4845 Tpr-Chr2 54002277 54005781 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4845 K07904 - jre:109014562 415.231