Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4769 ATGATAATGAAATCCTACATCCCAATGCTTTTGAAGCCTTCATTCTTGATGGGACTTGTTTTTACCAAATGGGCATCCACAGTTTTACTCTGCTATTTTCTCATCACTTCTACAGTATATTCAGTTGAGGGGTTACATGTTGGTTCTAAAGTTAGAGGAGTGAATTTAGGAGGGTGGTTGGTTATTGAAGGTTGGATCAAACCTTCATTGTTTGATGGCATTGCCAATGGAGACATGCTTGATGGGACAGAAGTGCAGTTTAAGTCAGTGACATTGCAGAAGTATGTATCAGCAGAGAATGGAGGAGGAATGAATGTGACAATTGATAGGGATGTTCCATCTTCATGGGAAACATTCAGGTTATGGAGAGTATCTGAATCAGAATTTCAATTCCGTACCACACAAGGCCAATTTCTTACATGCAATGGTAGAGGCTGCACTGTATCTGCAACAGCAAAATCGCCTTTAACACCAGAAACATTTGAAATTACGCGCAATGAGAAAAATAGGATTCACATTAAGATAAAGAATGGACCCTATCTGCAGGCTACAACTGGTAACCAGCTCACGGCAGACTATCCAGATGAACCGGGATGGGATGATAATTCAGCCACATTTGAAATGACAATTGCAGCGAATAACCTACATGGAGATTACCAGCTTGCAAATGGTTATGGACATGATAGCGCAGAAGATGTTCTTAGGAGACATAGAAATAGCTTTATTACAATGGAGGATTTCAAATTTCTATATGAACACGGAATAAATACCGTGAGAATACCAGTTGGGTGGTGGATTGCTTATGATCCTGATCCTCCAAATCCATATATTGGAGGAAGTCTTGAAGCTCTAGATAATGCATTTTCATGGGCACAAGAATATGATATAAAATGCATAATTGACCTTCATGCTGCTCCTGGTTCACAAAATGGGATGGAGCATAGTGCAAGCATAGATGGATTTACAGACTGGCCAACTTCTCCAGATTACATTTCAAAGTCATTACGTGTTATTGAATTTTTAATTTCTAGATATGCAACGCATTCTGCCTTGCTGGGAATTGAGCTTTTGAATGAACCATCTGCTGCCACAGTTCCCTTAGATATTTTAGTTTCCTATTACAAACAAGGCTACCAAATTGTTCGGAAATACTCTTCGTCGGCTTATGTGATAATTTGCCAGAGAATCGGCAATGCAGATCCTTTGGAGCTTTATCAGGCTAACATAGGATCTACCAACTTAGTTTTGGATTTGCATTTCTACAATCTCTTTGATAAATTCTTTGTTAATATGAGTCCCGGCGATAATGTACAATACATATACAAAAGTCGGGAAGGTCTGTTGCAGGCCTTCAATAATTCAAATGGCCCAGACATTTTTGTTGGAGAGTGGGTGAATGAGTGGAATGTGGCAAACGGATCGCTAACAGATTATCAGGACTTTGGAAAGGCACAGTTAGACGCCTATAATGCAGCTTCCTTTGGCTGGTGTTATTGGACTTTAAAAAATGACAGGGAGCATTGGGATTTTGAATGGAACATTAGGAACAACTATCTTCAATTAGGTAACTCACCCAGCAAAAAGAGCATATCCACTTTGGGATTGTTTGGATTAGCTTGCACTTGGTTTTGTCTACGTGATGTCTTTCGGATTATGATTTAA 1662 0.3941 MIMKSYIPMLLKPSFLMGLVFTKWASTVLLCYFLITSTVYSVEGLHVGSKVRGVNLGGWLVIEGWIKPSLFDGIANGDMLDGTEVQFKSVTLQKYVSAENGGGMNVTIDRDVPSSWETFRLWRVSESEFQFRTTQGQFLTCNGRGCTVSATAKSPLTPETFEITRNEKNRIHIKIKNGPYLQATTGNQLTADYPDEPGWDDNSATFEMTIAANNLHGDYQLANGYGHDSAEDVLRRHRNSFITMEDFKFLYEHGINTVRIPVGWWIAYDPDPPNPYIGGSLEALDNAFSWAQEYDIKCIIDLHAAPGSQNGMEHSASIDGFTDWPTSPDYISKSLRVIEFLISRYATHSALLGIELLNEPSAATVPLDILVSYYKQGYQIVRKYSSSAYVIICQRIGNADPLELYQANIGSTNLVLDLHFYNLFDKFFVNMSPGDNVQYIYKSREGLLQAFNNSNGPDIFVGEWVNEWNVANGSLTDYQDFGKAQLDAYNAASFGWCYWTLKNDREHWDFEWNIRNNYLQLGNSPSKKSISTLGLFGLACTWFCLRDVFRIMI* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4769 553 Pfam Cellulase (glycosyl hydrolase family 5) 242 504 IPR001547 GO:0004553|GO:0071704
Tpr2g4769 553 SUPERFAMILY (Trans)glycosidases 50 520 IPR017853 -
Tpr2g4769 553 PANTHER FASCIN 41 528 IPR010431 GO:0007015|GO:0051015
Tpr2g4769 553 ProSitePatterns Glycosyl hydrolases family 5 signature. 352 361 IPR018087 GO:0004553|GO:0005975
Tpr2g4769 553 PANTHER - 41 528 - -
Tpr2g4769 553 Gene3D - 63 203 - -
Tpr2g4769 553 Gene3D Glycosidases 204 529 - -
Tpr2g4769 553 SUPERFAMILY Actin-crosslinking proteins 85 196 IPR008999 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4769 Tpr-Chr2 53135011 53138830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4769 - - gmx:100809472 949.503