Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4758 ATGGCGGAGCTCCGTCACTCATCTTCACTCGGCGCCCGAGCCACTTCTTCTCCGATGAAACGCGACGCCGCCGCCGATTCATCTCCTCTCATTCCCGCAAACGACATCTCCGACGATCGTCACTCTCCTAAAGACCGCGACCGTCCTCTCTGCTCGCATTTCCATTACGTTTGTTCTTTCTTCACCGACGACCCTAGGGTTCCTCTTCATAACTCCAGGATCTCTATTTTCATCACCTTACTTCTAATCCTTGTTGGATTGATCTCATTGTTCACAATCCTACATAAATTGAATTCTCCTTACTTGTGTAAAAAAGATGGGATTGTTCTTCACTGTCCACATGTCAAAGAATCAGCATCTCTTTGGGAAAATCCTTACTCATCCACAACATCCTGGAAGCCGTGTGCTGAGCGTAGGGATGCTGCCATATCAGAACTTCCTCATGAAAATAAAACGAATGGCTATATATTCATTCACGCCGAAGGTGGTCTAAATCAGCAAAGAATTGCGATATGCAATGCAGTGGCTGTTGCAAAAATAATGAATGCCACTCTCATTTTGCCTGTATTGAAACAGGACCAGATTTGGAAAGACCAAACGAAATTTGAAGACATTTTTGACGTGGATCACTTCATTGACTACCTAAAGGATGATGTCCGTATTGTCCGTGATATCCCAGAATGGTTTACTGATAAAACAGAGCTATTTTCTAGTATAAGACGGACCGTGAAGAACATTCCAAAATATGCACCTGCACAATTTTACATCGACAATGTTCTGCCCCGCATCAAGGAGAAAAAGATTATGGCTCTGAAACCTTTTGTTGATAGGCTAGGATATGACAATGTTCCTCCAGAAATCAACAAGTTGAGATGTAGGGTCAATTATCACGCTCTGAAATTTCTTCCTGATATAGAGCAAATGGCTGATTTACTAGCATCAAGGATGAGAAACCGAACAGGCAGTTCAAATCCTTATATGGCACTGCATCTTAGATTCGAAAAAGGAATGGTGGGCCTATCGTTTTGTGATTTTGTGGGGACACGAGAGGAGAAAGCTGTAATGGCAGAGTATAGAAAAAAGGAGTGGCCTCGACGGTATAAGAATGGTTCCCACTTGTGGCAATTGGCTCTGCAGAAGCGAAAGGAAGGACGGTGCCCTCTAGAGCCTGGAGAAGTGGCTGTTATTCTTCGTGCTATGGGCTATATGAAGGAAACTCAAATTTATGTAGCTTCTGGACAAGTTTATGGTGGACAGAACCGGATGGCTCCCCTAAGGAATATGTTCCCTAATCTGGTTACAAAGGAGGAGTTGGCAACTAAAGAGGAGTTAGATGGTTTTAGAAAGCACGTGACGAGTCTTGCAGCTCTTGATTTCTTGGTGTGCTTGAAGTCAGATGTATTTGTGATGACTCATGGAGGCAACTTCGCTAAGCTGATCATCGGTGCCCGCAGATACATGGGTCACCGTCTAAAATCAATTAAGCCTGACAAAGGACTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTCCTTTTGTTGAAGATGTTATTGTTACTCACCAGACGAGGACAGGTTTACCGGAAGAGACTTTCCCTAACTACGACCTATGGGAAAACCCTCTGACTCCTTGCATGTGTAAAGCCTGA 1656 0.4408 MAELRHSSSLGARATSSPMKRDAAADSSPLIPANDISDDRHSPKDRDRPLCSHFHYVCSFFTDDPRVPLHNSRISIFITLLLILVGLISLFTILHKLNSPYLCKKDGIVLHCPHVKESASLWENPYSSTTSWKPCAERRDAAISELPHENKTNGYIFIHAEGGLNQQRIAICNAVAVAKIMNATLILPVLKQDQIWKDQTKFEDIFDVDHFIDYLKDDVRIVRDIPEWFTDKTELFSSIRRTVKNIPKYAPAQFYIDNVLPRIKEKKIMALKPFVDRLGYDNVPPEINKLRCRVNYHALKFLPDIEQMADLLASRMRNRTGSSNPYMALHLRFEKGMVGLSFCDFVGTREEKAVMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPGEVAVILRAMGYMKETQIYVASGQVYGGQNRMAPLRNMFPNLVTKEELATKEELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKPDKGLMSKSFGDPYMGWAPFVEDVIVTHQTRTGLPEETFPNYDLWENPLTPCMCKA* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4758 551 CDD O-FucT_plant 155 490 IPR024709 -
Tpr2g4758 551 PANTHER O-FUCOSYLTRANSFERASE 2-RELATED 1 551 - -
Tpr2g4758 551 PIRSF UCP009360 38 551 IPR024709 -
Tpr2g4758 551 Gene3D - 295 494 - -
Tpr2g4758 551 Pfam GDP-fucose protein O-fucosyltransferase 155 487 IPR019378 -
Tpr2g4758 551 MobiDBLite consensus disorder prediction 1 44 - -
Tpr2g4758 551 PANTHER PROTEIN PECTIC ARABINOGALACTAN SYNTHESIS-RELATED 1 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4758 Tpr-Chr2 53010385 53017617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4758 121 550 Miscellaneous Gene Families AT1G22460 35.920 7.86e-94 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4758 - - gmx:100809112 1020.38