LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr2g4743	ATGCCTTCTCGCGGCGGCGTTCCAGTGGCGGAGGCACTTCTCCCCTCTGGCCGAAACCCCGAGAGACTAAGCCTCCCAGCACTCCAATCAAAGATGAAATGCGACCCTGAAGGTTACGAATCAGAACTTCTCCTTATCCGTAGCCAATTCGATTCATCACTCGAACTCTTCAAACAACAAGCTGATATGAACTTCACTTCAATCTCCGGCATCAGCAACGATCCCACCGTCGCTAGAGATCTCGCTGAAAAAGCTATGTTTCTCTCACACGTTACTAGCTTTTTCCCTCAACATCTCACTGATTTCCCTCACAAAGTTGCGGAATTGCTTCATCGTGCTGCACGAACGCTTCCTTCTGGATTGAGAAATGACCTAGCGAAATCGCTTATCTTGCTTATCAATCGAGGGATTGTTAGTATTAAAGAGATGCTTCCGTTGTTTATGGAGCTTCAAACACTAGGTGATAAACCGTTGAGGGAATTGGCGTTTAAGCATATTGTTAAAAGTATAAAGCGTATGAACTTGAAGCATAAGGATGAAGCAAAAAACCGTGCACTTCAGAATATTCTTTTTGTTATGCTACAGCAAGAGGATGAAGATCGGGCTAGGAGGGCGCTTGTGACTCTATGCGACCTTCACAAGAGACAAATATGGTTTGATGAGAGAACGGCAAATGCAATTTGCACTGCTTGCTTTCATCCATCGTCAAGAATCATGATATCATCATTATGCTTTCTGCTTGATTATGAGAAGATTGAAAACTACCAAGATAGTGATGATTCAAGCAGTGACGAAGACACGACTGAATCACCGCAAGTTATTCTTAGAAGGGAGACAGTTTATAAGGCAAAACACCAAGGTACATTAGCTAGCAAGAAGAAAAAGAAAAACAAATTAGACCGCATAGTGCGCAACATGAAAAAGAAACAGCGGATATCTTCTGAAAGGAACAATAACATCTATTATTCACCACTGAACAATCTGATAGATCCCCAGGGTTTTGTTGAGAAGCTGTTCGCACGTCTGCAGAAATGTAATGAAAGATTCGAGGTCAAGATGATGATGTTGAAAGTGATTGCTCGGACAGTTGGGCTTCACCAGTTAATTTTGTTAAACTTTTACCCTTATCTTCAGAAATATATCCAGCCCCATCAACGAGATGTTACAAATTTGCTTGCAGCAGCGGTTCAGGCTTGTCATGATATGGTTCCTCCTGATGCAGTTGAGCCCTTATTCAAACAAATTGTCAATCAATTTGTACACGACCGCTCACGTCCAGAGGCTATCACTGTTGGAATAAATGCTGTCAGGGAGATATGCCTGCGTATGCCTCTGTTGATGAATGAAGACCTACTACAAGACCTTGCTCTATATAAGAAGTCACATGAGAAGGGAGTATCCATAGCCGCTCGATCTCTGATTGCATTATTCCGAGAGATTTGCCCTTCACTGCTAATTAAAAAGGACCGAGGGCGACCTACTAACCCTACGGCAAGACCAAAGGCCTATGGAGAAGTCAATGTTGCGTCTGACGTTCCTGATGCTGAGTTGTTGCAGACTATTGACGATGATGTTGAGCAGGAAGGTTTAAATTCTGATGATTCTGTATGCAGTGGCTCAGACAATGACCAGGAAAGTTTAAATTCTGATGATGAGAACCAGCTAGGCAGTGATGATGATGATGATGAAGTCAATGATCATGATGTTGTATCAGATGATGAAAACGATGGATGTTCTGATTTTGAAAACAGTGAAGATGTTGAAGACGAGGAGGATGATCTAGAAGATAGTGAAGAGGCTGAGGATGAGGATGGTGAGATTTCGGAAGATGGAGGAGATGGAGATGATGATCTCGATACTTATAGTCATGATGGAAGTGTGGAGACAAAAACTACATTAAAAGGCTCGGCAAAAAAGAGGAAGTTTAGCGATTTCAATGATCAACTTACAGCTGCTGATACAAGTCTCCGGGCTTTGAAGAAATTGGCAGGGACAACAACGGAGGATGCCCTACCAGAAAATGAAGATGGATTTCTTTCTACCGAAGACTTCCAGAGGATCAAGGAACTAAAGGCAAAAAAAGAGGCAAGAACTGCATTAGCACAGCACGGGCTTGTAAAGTCAACAACAAATAAGATTCGAAGCTCTGATCAACTAAGTTTAAAGCGAGTGGATGGTTCCATGCTTGAAGCTCATGTAAAGAGAAAGCTTAACAAGCAGGAGAGGCTGGAAATGGTTAAAGCAGGGAGGGAGGAAAGAGGAAAGTACCAGGCCAGAGCTGCTGTAAAACAGAAAAAGACGGGTGGTCTAAGTAACAAACAGAAGGAACACAAGAAAATTATGCCGATAGTTGCAAAGAGGAAAAAGATGGCAAGAACTCGGATAGCCAAAAGGAAAAAAGATCGGCGATCTGGTAAACAACAACGCGGGAAGAAAGCATGGAAACAGTAA	2451	0.4268	MPSRGGVPVAEALLPSGRNPERLSLPALQSKMKCDPEGYESELLLIRSQFDSSLELFKQQADMNFTSISGISNDPTVARDLAEKAMFLSHVTSFFPQHLTDFPHKVAELLHRAARTLPSGLRNDLAKSLILLINRGIVSIKEMLPLFMELQTLGDKPLRELAFKHIVKSIKRMNLKHKDEAKNRALQNILFVMLQQEDEDRARRALVTLCDLHKRQIWFDERTANAICTACFHPSSRIMISSLCFLLDYEKIENYQDSDDSSSDEDTTESPQVILRRETVYKAKHQGTLASKKKKKNKLDRIVRNMKKKQRISSERNNNIYYSPLNNLIDPQGFVEKLFARLQKCNERFEVKMMMLKVIARTVGLHQLILLNFYPYLQKYIQPHQRDVTNLLAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICLRMPLLMNEDLLQDLALYKKSHEKGVSIAARSLIALFREICPSLLIKKDRGRPTNPTARPKAYGEVNVASDVPDAELLQTIDDDVEQEGLNSDDSVCSGSDNDQESLNSDDENQLGSDDDDDEVNDHDVVSDDENDGCSDFENSEDVEDEEDDLEDSEEAEDEDGEISEDGGDGDDDLDTYSHDGSVETKTTLKGSAKKRKFSDFNDQLTAADTSLRALKKLAGTTTEDALPENEDGFLSTEDFQRIKELKAKKEARTALAQHGLVKSTTNKIRSSDQLSLKRVDGSMLEAHVKRKLNKQERLEMVKAGREERGKYQARAAVKQKKTGGLSNKQKEHKKIMPIVAKRKKMARTRIAKRKKDRRSGKQQRGKKAWKQ*	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tpr2g4743	816	PANTHER	HSDA/SDA1-RELATED	22	815	IPR027312	GO:0000055\|GO:0042273
	Tpr2g4743	816	MobiDBLite	consensus disorder prediction	491	510	-	-
	Tpr2g4743	816	Pfam	NUC130/3NT domain	87	138	IPR012977	-
	Tpr2g4743	816	MobiDBLite	consensus disorder prediction	749	816	-	-
	Tpr2g4743	816	MobiDBLite	consensus disorder prediction	545	617	-	-
	Tpr2g4743	816	Pfam	SDA1	447	812	IPR007949	-
	Tpr2g4743	816	MobiDBLite	consensus disorder prediction	529	638	-	-
	Tpr2g4743	816	PANTHER	PROTEIN SDA1 HOMOLOG	22	815	-	-
	Tpr2g4743	816	MobiDBLite	consensus disorder prediction	780	816	-	-
	Tpr2g4743	816	SUPERFAMILY	ARM repeat	84	477	IPR016024	-
	Tpr2g4743	816	Coils	Coil	289	312	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr2g4743	Tpr-Chr2	52843701	52850184	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr2g4743	K14856		-	gmx:100816774	1082.78