Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4742 ATGAATCCTCTATGCTGCATTGCTCCGGTTTCGATCGATCGAGATCGAGGCAACTCAGTAGTGTCCAAATCGAATACTCAGTGTCAGTTAGGGTTAGATTCGTCGATTAAAACGGTTAACTCTGCTTCCAAATCCAGTTTTTCAACTCATGACTCGTCGGTTACAGGTGATTCGGTTAAATCATCTTTTGCTGGTGGTTTGAATCATGAAGATGATGATGATGATGTTGTTGTTTACGAGGCTAAAGATTGTAAGGTGTTAAATGGCGGTGTTGCTGGTAGTGTGGCTGGGATATTGTATAAATGGGTGAATTATGGTAAAGGTTGGAGGTCTAGGTGGTTTGTTTTGGAAGATGGTGTGCTTTCTTATTATAAGATTCATGGACCTGATAAGATCTTGACGAGTCCTGCTAAGGATAGGAGTGTTAGAGTCATCGGAGATGAGTCGTCGAAGTTTGTGAAAAAGTCGAATTGGAATCGAAGTGGTAATGGAGCTACTAAGCAATGCAAGCCTTTTGGTGAGATACATTTGAAGGTTTCTTCAGTTCGCTTCAGCAAGTCTGATGACAAGCGGCTTTCCGTATTTACTGGGACAAGAACTCTTCACTTGAGGTGTGTGTCTAGAGAAGATAGGGCCATGTGGATTGAAGCCCTGCAGTCTGCAAAAGATCTTTTTCCCAGAGCTCTAACAAGCAGCGATCTTGCAACTCCAGAAGATATCGTAGTTTCGACAGAGAAGCTGCGATCAAGATTATCACAGGAAGGCATAAATGAAGAAATCATTAATGACTGTGAGTCTATCATGCTATCTGAAGTCTCATATCTTCAAGGCAAGTTGAAGTTTCTTCAGCAGAAACATGTTATGTTGTTGGACACCTTAAAACAACTGGAGACGGAGAAAATAGAGTTGGAAACTACTGTAGTAGATGAAACAAAGGAACGTGAGTCATATTGCGGACAAGCGAATAGAAGGTTTAGTGATTTCTATTCTGTTATGTCGGAAGGCAGTGCTACAGACTCGGTAGTCGATAATGAAAGTCAAGATGGAGCAGATGCTGAAACAGATGATGAAGATGGAACATATTTTGATACAAACGAGACTTTATATTCAGATGCCTTAAGAAGTGCTTCCTATCGAAGTAGAGAAGGTACAGGCAATGCCAGTATATATGATAGAGATTTTAATCTCCATGATGGTTTGCATGGGTTTGAGATGGCGATCAAAGATATAAGCTATCCTTATGTCAAAAGAAGGGATAATTTACCAGAACCAAAAGAGAAAGACAAACCTGTTGGCTTGTGGTCAATTATTAAAGACAATATCGGGAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAATGAACCACTCTCTTCATTGCAAAAGTGTTTTGAAGACCTGGAGTACTCAAACCTAGTTGACAGAGCATTGGAATGGGGAAAGCAGGGGAATGAATTGATGAGAATTCTAAATATTGCAGCATTTGCTGTGTCTGGCTATGCGTCCACTGAAGGTCGACAGTGTAAACCTTTCAATCCTCTGCTTGGGGAGACTTACGAAGCTGACTATCCAGATAAAGGAGTTAAATTTTTTTCGGAAAAGGTTAGTCATCATCCAATGGTTGTTGCTTGTCACTGTGAGGGAAGAGGATGGAAGTTCTGGGCAGACTCCAATTTGAAAGGAAAGTTCTGGGGGCGTTCTATTCAGTTAGATCCTGTGGGTGTTCTCACCCTACAGTTTGAAGATGGTGAAACATTTCAGTGGAGCAAGGTCACTACTTCCATATACAATATTATACTGGGTAAAATTTATTGTGACCACTATGGTACTATGCACATCAAGGGGAGCGGAAACTACTCTTGCAAACTGAAGTTCAAAGAGCAATCTATCATAGACCGAAATCCACATCAGGTCCATGGGTTTGTTCAAGACAACAGAACTGGAGAGAAGGTAGCAATGTTAATTGGGAAGTGGGACGAAGCAATGTATTATGTACTTGGGGATCCAACTACAAAGCCCAAAGGTTATGATCCCATGACAGAAGCTGCATTATTGTGGGAAAAGGACAACTATGTCCCCAAGACGAGATACAACCTCTCTCCCTTTGCAATTTCCTTGAATGAAATAGTGCCCGGTTTATTGGTGAAGTTGCCTCCGACTGACTCAAGGTTGAGACCAGATCAAAGACATCTGGAAAATGGGGAGTATGAATATGCAAATGCAGAGAAACTAAGGCTTGAACAATTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCCAGATGGTTTAAGAAGGATGAAGATGGTTCTTACCGATACATGGGTGGCTATTGGGAGGCAAGAGAAAAGAACAATTGGGATGGAATCCCTGATATATTTGGACAAGGTTGTGATTTGCCTTCATGTTCTGAAGAGAATGTATCCTACTGA 2442 0.414 MNPLCCIAPVSIDRDRGNSVVSKSNTQCQLGLDSSIKTVNSASKSSFSTHDSSVTGDSVKSSFAGGLNHEDDDDDVVVYEAKDCKVLNGGVAGSVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKILTSPAKDRSVRVIGDESSKFVKKSNWNRSGNGATKQCKPFGEIHLKVSSVRFSKSDDKRLSVFTGTRTLHLRCVSREDRAMWIEALQSAKDLFPRALTSSDLATPEDIVVSTEKLRSRLSQEGINEEIINDCESIMLSEVSYLQGKLKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQANRRFSDFYSVMSEGSATDSVVDNESQDGADAETDDEDGTYFDTNETLYSDALRSASYRSREGTGNASIYDRDFNLHDGLHGFEMAIKDISYPYVKRRDNLPEPKEKDKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSNLVDRALEWGKQGNELMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGVKFFSEKVSHHPMVVACHCEGRGWKFWADSNLKGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWEKDNYVPKTRYNLSPFAISLNEIVPGLLVKLPPTDSRLRPDQRHLENGEYEYANAEKLRLEQLQRQARKMQERGWQPRWFKKDEDGSYRYMGGYWEAREKNNWDGIPDIFGQGCDLPSCSEENVSY* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4742 813 SUPERFAMILY PH domain-like 95 223 - -
Tpr2g4742 813 Gene3D - 729 792 - -
Tpr2g4742 813 MobiDBLite consensus disorder prediction 336 359 - -
Tpr2g4742 813 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED PROTEIN 1D 2 802 - -
Tpr2g4742 813 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 2 802 IPR000648 GO:0008289
Tpr2g4742 813 Coils Coil 740 760 - -
Tpr2g4742 813 Gene3D - 518 685 - -
Tpr2g4742 813 Pfam Pleckstrin homology domain 97 220 - -
Tpr2g4742 813 Pfam Oxysterol-binding protein 433 786 IPR000648 GO:0008289
Tpr2g4742 813 CDD PH_ORP_plant 95 227 - -
Tpr2g4742 813 SUPERFAMILY Oxysterol-binding protein-like 428 799 IPR037239 -
Tpr2g4742 813 Gene3D - 92 225 IPR011993 -
Tpr2g4742 813 SMART PH_update 93 225 IPR001849 -
Tpr2g4742 813 Coils Coil 279 313 - -
Tpr2g4742 813 ProSiteProfiles PH domain profile. 92 223 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4742 Tpr-Chr2 52833952 52841035 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4742 K20456 - gmx:100788779 1467.6