Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4717 ATGTTCAAAAAGGTATTTGGTAAACTACCTAAAAAGTCCTCAAAAGGTTCAGAGAATCGTGAACAAAGTGGGAATTCAAGAAGCCATGGTGGTGGTGTTGCAACCTCGAAAAACAGTGATGTTGTTGTTAACCAATCAGGGAGTAGCAAAACTGGTAATTCTTCTTCTACTTTGAATGTAGGACAATATCATAATCATGGTAATAAATCTTCATTACCTGTTAATGAGAATTCCAATGGAAATTTTAATTCTTATGAAGCATTACCAGCATTTAAGGATGTTCCTAATTCTGAAAAACCGAGCTTGTTTATAAGAAAGCTTAAGATGTGTAGTGTTGTTTTTGACTTCACTGACCCTACCAAGCATCTTAAGGAAAAAGAGATTAAGAGACAAGCTTTGGTGGAACTTGTTGATTATGTGTCTTCTGTTAATGCTAAATTTACTGAGAATGTAATGCAAGAGGTTGTGAAGATGGTGTCTGTAAATATATTCAGAACACTAAGTCCTCAACCGCGCGAAAACAAGCTTGTTGATGGTGTTGAATTGGAGGAGGAGGAGCCTTCGATGGATCCTTCTTGGCCTCATTTGCAAATTGTGTATGAGCTTTTTCTTAGGTTTATTGCATCGCCTGAGCTGGATGCAAAGTTGGCTAAGAGATTCATTGATCAATCGTTCATTTTGAGGCTGCTTGATTTGTTTGACTCCGAAGATCCTAGAGAAAGGGAATACTTGAAAATGTCTTTGCATCGCATCTATGGCAAGTTAATGGCGCATCGCCCTTTCATCAGGAAATCAATCAATAACGTCTTTTTGAATTTTGTTTTCGAGACTGAGAAGCATAATGGGATTGCTGAGTTCTTGGAAATTCTTGGGAGTATTATTAATGGTTTTGCGTTGCCGTTGAAAGAAGAGCATAAACTGTTTCTGGTTCGTATATTGATTCCGTTGCACAAACCAAAGTGCTTGGCAATGTATCATCAGCAGTTATCTTATTGCATTACTCAATTCGTGGAGAAAGACTGCAAGCTTGCTGATACTATCATTAGGGGGTTATTGAAGTACTGGCCAATAACAAATAGTTCAAAGGAAGTTATGTTTCTAGGCGAGTTGGAAGAAGTTTTGGAAGCAACTCAACCTCCAGAATTCCAGCGATGTATGGTGCTATTGTTTCGTCGGGTTGCTCATTGTTTGAATAGCCCCCATTTTCAGGTGGCGGAAAGAGCTTTGTTCTTGTGGAATAACGATCACATTGTGAACTTAATCAAACAAAACTGCAAAGTGATACTGCCAATCATCTTTCCTGCTTTGGAGAGAAATACTAAAACTCATTGGAATCAAGCTGTCCATAGCTTGACTTTAAATGTTCAGAAGATTTTTCACGATCTCGATCCTGATCTGTATAAAGAATGCTTACAAAAGTTCGAGCAAGATGAATCAAAGGAAGAGGAAGTGACAGCAGGACGTGAAGCCACGTGGAAACGCTTGGAGGAGGTTGCTGCAAAGAAAGCTGCAAGTAACGAAGCTGTGCTTATTAGTAACCTCGCAAATCTGCAGGTTAGATAG 1563 0.389 MFKKVFGKLPKKSSKGSENREQSGNSRSHGGGVATSKNSDVVVNQSGSSKTGNSSSTLNVGQYHNHGNKSSLPVNENSNGNFNSYEALPAFKDVPNSEKPSLFIRKLKMCSVVFDFTDPTKHLKEKEIKRQALVELVDYVSSVNAKFTENVMQEVVKMVSVNIFRTLSPQPRENKLVDGVELEEEEPSMDPSWPHLQIVYELFLRFIASPELDAKLAKRFIDQSFILRLLDLFDSEDPREREYLKMSLHRIYGKLMAHRPFIRKSINNVFLNFVFETEKHNGIAEFLEILGSIINGFALPLKEEHKLFLVRILIPLHKPKCLAMYHQQLSYCITQFVEKDCKLADTIIRGLLKYWPITNSSKEVMFLGELEEVLEATQPPEFQRCMVLLFRRVAHCLNSPHFQVAERALFLWNNDHIVNLIKQNCKVILPIIFPALERNTKTHWNQAVHSLTLNVQKIFHDLDPDLYKECLQKFEQDESKEEEVTAGREATWKRLEEVAAKKAASNEAVLISNLANLQVR* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4717 520 MobiDBLite consensus disorder prediction 1 78 - -
Tpr2g4717 520 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 88 499 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr2g4717 520 Gene3D - 95 498 IPR011989 -
Tpr2g4717 520 PIRSF PP2A_B56 2 518 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr2g4717 520 SUPERFAMILY ARM repeat 100 481 IPR016024 -
Tpr2g4717 520 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 513 - -
Tpr2g4717 520 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 513 IPR002554 GO:0000159|GO:0007165|GO:0019888
Tpr2g4717 520 MobiDBLite consensus disorder prediction 19 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4717 Tpr-Chr2 52550947 52556983 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4717 K11584 - gmx:100811438 847.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4717 2 52550947 52556983 Tpr2g4717 2 52550947 52556983 ECH