Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr2g4698 ATGCTTTCATTTTCAACTTTTTTTCCTTTCACCATTACCATAACTAACCACCTTGAAAATTCAGTTTCACAAACAATAACAACAATGCCATTGCCACCATCAAATTTCCCTCTCCGTTGGGAAACAACAGCACAACAATGGTGGTACGCATCACCAATCGATTTAGCAGCAGCAAACGGTCACTACGATCTCGTCATCGAACTTCTTCACCTCGACACAAATCTCCTCATCAAACTCACTTCTCTTCAACGAATTCGCCGTCTCGAATCTCTCTGGAACTCTCAGTTCTCCACCGTCGCTAAATGTCGTTCTCGCGTCGCGAAAAATCTCATGATCGAATGTGAAACGGAGAAAAAAGGTAGAAAAATTAACTCTCTAGTTAAAGCTGGTTATGGTGGATGGCTTCTTTATACTGCTGCTTCTGCTGGTGATGTTGATTTTGTTTGTGAATTGTTGAGAAGAGAATCTTCTCTTGTTTTTGGTGAAGGTGAGTATGGTGTTACTGATATTTTGTATGCTGCTGCTAGGAGTAAAAATTGTGAGGTTTTTAAGATTTTGTTTGATTGTGCAATTTTGAAAAATAGTGATGAATTGGTTTTGGATGAGGTTTTTAAGATTGATATGGTTAATAGAGGTGTTCATGCTGCTGCTAGAGGTGGTAATTGGGAGATATTGAAAGAGTTTGTTGGAAGTGATTCTGATATTTTAGCTTATAGAGATTCTTATGGATGTACTGTTTTGCATACAGCTTCTGCTACAGGACAAGTTGAGGTGGTGAGAAAGCTACTGGAATCATTTGATGTTATCAACTTAACAGATGCTCAAGGGAACACTGCATTACATGTAGCTTGTTACAGTGGTTACTTACCTGTGGTAGAGATTCTGATGCATGCTTCTCCCTCACTAGCATCGTTAACCAACCACCATGGAGATACTTTTCTTCATTTGGCAGTGGCTGGTTTCAAAAGTCCTGGTTTCTGTAGACTAGACAAGCATACCGAACTCATGAAGCAATTGGTGAGTGAAAAGATTGTGAAGACACAAGACATCATCAATGTTAAGAACAACGATGGAAGAACTGCTCTTCATGTATCAGTGATCGATAACATCCAATGTGATGTAGTGGAATTATTGATGTCTGTGCCATCAATTGATTTGAACGTTTGTGATTCTGATGGGATGACCCCTTTGGATCTTTTGAAGCAAAGATCACAATCAGCATCTTCCGATATTTTAATCAAACGGTTGATTTCTGCGGGAGGGATAAATTGTAAACTTAGTTCATATAATTCTGAATCAAGTTGCACGCCGCAGAAGATCCAAATCAGTGTAAATGGAGGTAGTCCTGGGACTTCATTTAGAATACCAGATGCAGAGATATTCTTGTACACCGGCATCGAGAATGCATCTAATGCTAATTATGATCAAACAAGTCTTGAATCATATTCATGTTCAAGTGAACTAGGTGATACTAATTTTGACGCCGTCAATTCACCATATAACAACAAGTCTCATTCTGTCAATTATACAGCAAGACGCTTAAAGTATCTTCTTAGGTGGCCTAGGAGAAAAGATACAAAAGCAACTTTCTCAGAATTGGAAGATGATGATTCTCTTGATCCTTTTAGTTCAAGTAGAAACTTGGAAGAATTTTCAATCCCATTACGGCAAAGATACTCACAACCATGCTCCCTTAGAGGACAATCTATAAGGAGTTCAACTCCAAGTCCATCCTCTAAAATGAATTTCACTGCAGGCCTCATGCAAGGAGTAATTCAGTTAAATCCACATGGTACTCTTCCTACTCATTCAACTCCTAATCTTTTTCAAGAATTATCTGTGGTTTCTCTATCTTCGATAAAAAAACAAAAGGGTCTTGATATAATGGGACCCTCTTGCTCGTATCGGTCTATAAAAGATGATGGCGCACTTCAATTGAACTACAAACAGGGTTCTTTCAATAAGAAAACATTGATGAATCGATATCTTTCTTTTGGAGCAGAAGGACTGACGATGGAAGATACAAATAGATGTGAATCAAATGGGAGTTATAAGCGTTTCAGTTCTTTAGTTGCCTAG 2079 0.3843 MLSFSTFFPFTITITNHLENSVSQTITTMPLPPSNFPLRWETTAQQWWYASPIDLAAANGHYDLVIELLHLDTNLLIKLTSLQRIRRLESLWNSQFSTVAKCRSRVAKNLMIECETEKKGRKINSLVKAGYGGWLLYTAASAGDVDFVCELLRRESSLVFGEGEYGVTDILYAAARSKNCEVFKILFDCAILKNSDELVLDEVFKIDMVNRGVHAAARGGNWEILKEFVGSDSDILAYRDSYGCTVLHTASATGQVEVVRKLLESFDVINLTDAQGNTALHVACYSGYLPVVEILMHASPSLASLTNHHGDTFLHLAVAGFKSPGFCRLDKHTELMKQLVSEKIVKTQDIINVKNNDGRTALHVSVIDNIQCDVVELLMSVPSIDLNVCDSDGMTPLDLLKQRSQSASSDILIKRLISAGGINCKLSSYNSESSCTPQKIQISVNGGSPGTSFRIPDAEIFLYTGIENASNANYDQTSLESYSCSSELGDTNFDAVNSPYNNKSHSVNYTARRLKYLLRWPRRKDTKATFSELEDDDSLDPFSSSRNLEEFSIPLRQRYSQPCSLRGQSIRSSTPSPSSKMNFTAGLMQGVIQLNPHGTLPTHSTPNLFQELSVVSLSSIKKQKGLDIMGPSCSYRSIKDDGALQLNYKQGSFNKKTLMNRYLSFGAEGLTMEDTNRCESNGSYKRFSSLVA* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr2g4698 692 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 32 681 - -
Tpr2g4698 692 Gene3D - 207 323 IPR036770 -
Tpr2g4698 692 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 32 681 - -
Tpr2g4698 692 ProSiteProfiles Ankyrin repeat region circular profile. 275 296 - -
Tpr2g4698 692 Pfam Ankyrin repeats (3 copies) 214 297 IPR002110 GO:0005515
Tpr2g4698 692 ProSiteProfiles Ankyrin repeat profile. 275 307 IPR002110 GO:0005515
Tpr2g4698 692 Gene3D - 327 437 IPR036770 -
Tpr2g4698 692 ProSiteProfiles Ankyrin repeat region circular profile. 242 264 - -
Tpr2g4698 692 SMART ANK_2a 131 160 IPR002110 GO:0005515
Tpr2g4698 692 SMART ANK_2a 392 426 IPR002110 GO:0005515
Tpr2g4698 692 SMART ANK_2a 242 271 IPR002110 GO:0005515
Tpr2g4698 692 SMART ANK_2a 48 77 IPR002110 GO:0005515
Tpr2g4698 692 SMART ANK_2a 208 237 IPR002110 GO:0005515
Tpr2g4698 692 SMART ANK_2a 309 348 IPR002110 GO:0005515
Tpr2g4698 692 SMART ANK_2a 275 304 IPR002110 GO:0005515
Tpr2g4698 692 SMART ANK_2a 165 195 IPR002110 GO:0005515
Tpr2g4698 692 SMART ANK_2a 357 388 IPR002110 GO:0005515
Tpr2g4698 692 Gene3D - 41 202 IPR036770 -
Tpr2g4698 692 SUPERFAMILY Ankyrin repeat 135 413 IPR036770 -
Tpr2g4698 692 ProSiteProfiles Ankyrin repeat profile. 242 274 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr2g4698 Tpr-Chr2 52332295 52335855 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr2g4698 135 398 Miscellaneous Gene Families AT1G07710 29.368 5.33e-22 98.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr2g4698 - - gmx:100796359 890.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g4698 2 52332295 52335855 Tpr2g4698 2 52332295 52335855 PCT