Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr2g4694 | ATGTTGACAGTTCTGCGAGCACGGGCTTGTTCTTCGCTTTGTGCTTCAAACCCACAGCCCCTTCTTCAACCATGGAAGCTAGGGTTTTCTTCTCTATCCACTACCGTTGACGCTGGCGTCAGTAAATGTACCCTAGATCTGCAAGAGATCGAGAAGATTCTGACAGACGTTAAAGCTGATGACGTGAAGATAATTCCAGTTCCCAAGCAAAACGATTGGGCTGATTTCATGGTACTTGCCACTGGTAGATCCACCTGGCACGTCAAGAATATTGCTCAAGCCCTAATTTACAAGGCTAAGCAGAAGCAGCAAGGAGTTGAGCGAATGACGCTGCCTAGTGTGCAAGGACAAAATGAGGGCAAGTGGATCGTCATTGACTCTGGTAAAGTGATAGTTCATGCCCTCGATGAAAATGCAAGGGCTTACTATAATTTGGAAGGTCTTTGGTCCCGCGGGACATTGCAAAATGAACCTGTTGAGGATTTACAAAAAGCTTTGGTGAAGGTCCGGCGGAAAAACAATTCCAAGAAATCTGCCCAAAAGAATGCCTAA | 552 | 0.4601 | MLTVLRARACSSLCASNPQPLLQPWKLGFSSLSTTVDAGVSKCTLDLQEIEKILTDVKADDVKIIPVPKQNDWADFMVLATGRSTWHVKNIAQALIYKAKQKQQGVERMTLPSVQGQNEGKWIVIDSGKVIVHALDENARAYYNLEGLWSRGTLQNEPVEDLQKALVKVRRKNNSKKSAQKNA* | 184 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr2g4694 | 183 | Pfam | Ribosomal silencing factor during starvation | 49 | 149 | - | - | |
| Tpr2g4694 | 183 | PANTHER | MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1 | 23 | 174 | - | - | |
| Tpr2g4694 | 183 | Gene3D | Beta Polymerase, domain 2 | 44 | 164 | IPR043519 | - | |
| Tpr2g4694 | 183 | Hamap | Ribosomal silencing factor RsfS [rsfS]. | 40 | 150 | IPR004394 | - | |
| Tpr2g4694 | 183 | TIGRFAM | rsfS_iojap_ybeB: ribosome silencing factor | 47 | 149 | IPR004394 | - | |
| Tpr2g4694 | 183 | PANTHER | IOJAP SUPERFAMILY ORTHOLOG | 23 | 174 | IPR004394 | - | |
| Tpr2g4694 | 183 | Coils | Coil | 159 | 179 | - | - | |
| Tpr2g4694 | 183 | SUPERFAMILY | Nucleotidyltransferase | 48 | 156 | IPR043519 | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr2g4694 | - | - | gmx:100500386 | 243.432 |