Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr2g4687 | ATGAAACTGTGTCCAAGAGAAATCGAAAAACTAGTGCTTCACAATGCTGGCTATCTTGCTCAGAAACGTCTTGCTCGTGGTTTGAAACTCAACTCTACTGAAGCTCTTGCTCTCATAGCAACACAGATTGTGGAATTTGTTCGTGATGGCAATAAGACTGTTGCAGAGCTAATGTCAATTGGGAGAGAACTATTAGGAAGGAGACAAGTTCTTTCGGCTGTTCCGCATCTCTTGGAAACTGTTCAGGTTGAAGCTACATTTCATGATGGGACTAAGTTAATCACGGTTCATAACCCAATTGCAAGTGAAAATGGAAACCTTGAACTAGCATTATATGGTTCTTTTCTTCCAGTACCTTCACTTGACATGTTTATTGAGAACAAAGAAGATAGTATCATTCCCGGTGAGCTAAAATCTGTAGATGGAAGCGTGATTCTTAACGCTGGAAGGGAGGCAGTCTCTCTTAAAGTTGTAAACAATGGAGACAGGCCAGTTCAGGTTGGAAGCCACTATCATTTTATTGAAGTAAATCCCTACTTAACCTTTGATCGAAGAAAAGCATTTGGCAAACGCCTCAATATAGCCTCTGGGACTACCACGCGCTTTGAGCCAGGGGAAAGTAAAAGTGTTGTACTTGTAAGCATTGGAGGTAACAAAGTCATCCGAGGAGGTAACAACATTGTTGATGGTCCAGTTAACGATTCCAATTGCATAGCAGCTATGGAAGCTGTGACAACAAGGGGGTTCGGGCATAAAGACGATGAAAATGCAAGGGAAGGTATTACCGGAGAAGACTATTCGTTGACTAAAGTAATTCCTCAAGAGGAATATGCTAACAAGTATGGTCCCACTGTTGGTGACAAAATTCGTCTTGGTGACACTAACTTGTTTGCGAAAATTGAAAAAGATTTTGCTGTCTATGGTGATGAATGTGTTTTTGGAGGTGGGAAAACAATAAGAGATGGAATGGGTCAGTCGTGTGGCCATCATCCTGATCACTCCTTGGATACTGTTATAACAAATGCAGTGATCATTGATTACACCGGAATTTACAAAGCAGATATTGGTATTAAAGATGGCCTTATTGCCTCAATTGGAAAAGCAGGAAATCCAGACGTTATGACTGGCGTATCTGATAATATGATCGTTGGGGCTAATACTGAAGTTATTTCTGGAGAGGGCTTTATTGTAACAGCCGGGGCTATAGATTGTCATGTGCATTTTATATGCCCTCAATTAGTATATGAAGCCGTATCAAGTGGGATTACAACGTTAGTGGGAGGAGGAACCGGACCAGCATATGGAACGCGTGCTACAACTTGTACACCGGCACCGATTCAGATGCAAATGATGCTGCAATCAACAGATGAGCTGCCTCTGAACTTCGGTTTTAATGGAAAAGGAAATTGTGCCAAGCCTGATGAATTACATGAAATAGTCAAGGCCGGAGCTATGGGACTGAAACTGCACGAGGATTGGGGAACTACACCAGCCGCAATAGACAGCTGTTTGACTGTTGCAGAACAATATGATATACAGGTTAACATACATACTGACACCTTAAATGAATCTGGATTTGTGGAACATACAATTGCTGCATTTAAAGAAAGAACTATCCATACTTACCACAGTGAAGGTGCAGGTGGTGGCCATGCTCCAGATATCATCAAAGTATGTGGTGTGAAGAATGTCTTACCCTCGTCCACAAATCCTACGCGCCCTTTTACATCAAATACCATAGATGAGCATCTTGACATGTTGATGGTCTGCCATCATCTTGATAAGAATATTCCAGAAGATGTTGCTTTTGCAGAATCAAGGATAAGAGCCGAAACAATTGCTGCTGAAGATATTTTGCATGATATGGGTGCAATTAGCATTATAGCTTCTGATTCACAGGCTATGGGTAGAATTGGAGAGGTGATAAGCAGAACTTGGCAAACTGCCAATAAGATGAAGTCGCAAAGAGGACCTCTGCAGCCTGATGATTCAGACAATGACAACTTTCGAATCAAACGTTATGTTGCAAAGTATACTATAAATCCAGCTATAGCAAATGGTTTGTCACGATATATTGGTTCAGTTGAGGTGGGAAAGTTAGCTGATCTTGTATTATGGCAACCGGCTTTTTTTGGAGCAAAACCGGAAATGGTGATCAAAGGTGGTGACATTACATGGGCTAACATCGGTGACCCAAACGCTAGCATCCCAACACCTGAACCGGTGATTATGAGACCTATGTTTGGAGCATTTGGCAAAGCTGGCAGTGCAAACTCTATTGCTTTTGTGAGCAAGGCAGCTTTGGACTACGGTGTAAAAGCTTTATATGGACTTAACAAGCGGGTGAAAGCCGTGGACAATGTGAGGAAGCTCACCAAACTAGACATGAAACTGAATGACACCCTTCCAGAAATCACTGTGGACCCAGAGACATACACAGTCACTGCAGATGGAGAGGTTCTATCATGTACTCCAGCCACTACTGTTCCTCTTTCTCGAAATTACTTCCTCTTCTAA | 2517 | 0.4211 | MKLCPREIEKLVLHNAGYLAQKRLARGLKLNSTEALALIATQIVEFVRDGNKTVAELMSIGRELLGRRQVLSAVPHLLETVQVEATFHDGTKLITVHNPIASENGNLELALYGSFLPVPSLDMFIENKEDSIIPGELKSVDGSVILNAGREAVSLKVVNNGDRPVQVGSHYHFIEVNPYLTFDRRKAFGKRLNIASGTTTRFEPGESKSVVLVSIGGNKVIRGGNNIVDGPVNDSNCIAAMEAVTTRGFGHKDDENAREGITGEDYSLTKVIPQEEYANKYGPTVGDKIRLGDTNLFAKIEKDFAVYGDECVFGGGKTIRDGMGQSCGHHPDHSLDTVITNAVIIDYTGIYKADIGIKDGLIASIGKAGNPDVMTGVSDNMIVGANTEVISGEGFIVTAGAIDCHVHFICPQLVYEAVSSGITTLVGGGTGPAYGTRATTCTPAPIQMQMMLQSTDELPLNFGFNGKGNCAKPDELHEIVKAGAMGLKLHEDWGTTPAAIDSCLTVAEQYDIQVNIHTDTLNESGFVEHTIAAFKERTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNPTRPFTSNTIDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIIASDSQAMGRIGEVISRTWQTANKMKSQRGPLQPDDSDNDNFRIKRYVAKYTINPAIANGLSRYIGSVEVGKLADLVLWQPAFFGAKPEMVIKGGDITWANIGDPNASIPTPEPVIMRPMFGAFGKAGSANSIAFVSKAALDYGVKALYGLNKRVKAVDNVRKLTKLDMKLNDTLPEITVDPETYTVTADGEVLSCTPATTVPLSRNYFLF* | 839 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr2g4687 | 838 | SUPERFAMILY | Composite domain of metallo-dependent hydrolases | 680 | 750 | IPR011059 | GO:0016810 | |
| Tpr2g4687 | 838 | CDD | Urease_gamma | 5 | 100 | IPR002026 | GO:0016151|GO:0043419 | |
| Tpr2g4687 | 838 | Pfam | Urease subunit beta-alpha linker domain | 232 | 265 | IPR040881 | - | |
| Tpr2g4687 | 838 | Pfam | Amidohydrolase family | 396 | 721 | IPR006680 | GO:0016787 | |
| Tpr2g4687 | 838 | PRINTS | Urea amidohydrolase (urease) protein signature | 566 | 583 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Tpr2g4687 | 838 | PRINTS | Urea amidohydrolase (urease) protein signature | 605 | 621 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Tpr2g4687 | 838 | PRINTS | Urea amidohydrolase (urease) protein signature | 672 | 687 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Tpr2g4687 | 838 | PRINTS | Urea amidohydrolase (urease) protein signature | 698 | 711 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Tpr2g4687 | 838 | Hamap | Urease subunit alpha [ureC]. | 270 | 838 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Tpr2g4687 | 838 | Gene3D | - | 400 | 819 | - | - | |
| Tpr2g4687 | 838 | TIGRFAM | urease_gam: urease, gamma subunit | 1 | 102 | IPR002026 | GO:0016151|GO:0043419 | |
| Tpr2g4687 | 838 | Pfam | Urease alpha-subunit, N-terminal domain | 272 | 390 | IPR011612 | - | |
| Tpr2g4687 | 838 | SUPERFAMILY | Urease, beta-subunit | 132 | 261 | IPR036461 | - | |
| Tpr2g4687 | 838 | SUPERFAMILY | Metallo-dependent hydrolases | 400 | 838 | IPR032466 | - | |
| Tpr2g4687 | 838 | ProSiteProfiles | Urease domain profile. | 400 | 838 | IPR017951 | GO:0006807|GO:0009039|GO:0016151 | |
| Tpr2g4687 | 838 | Gene3D | Urease, subunit C, domain 1 | 270 | 751 | IPR011059 | GO:0016810 | |
| Tpr2g4687 | 838 | TIGRFAM | urease_alph: urease, alpha subunit | 272 | 838 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Tpr2g4687 | 838 | Pfam | Urease beta subunit | 134 | 230 | IPR002019 | GO:0035550|GO:0043419 | |
| Tpr2g4687 | 838 | TIGRFAM | urease_beta: urease, beta subunit | 132 | 233 | IPR002019 | GO:0035550|GO:0043419 | |
| Tpr2g4687 | 838 | Hamap | Urease subunit beta [ureB]. | 132 | 232 | IPR002019 | GO:0035550|GO:0043419 | |
| Tpr2g4687 | 838 | PIRSF | Urease | 1 | 838 | IPR008221 | GO:0006807|GO:0009039|GO:0016151 | |
| Tpr2g4687 | 838 | ProSitePatterns | Urease nickel ligands signature. | 398 | 411 | IPR029754 | GO:0016151 | |
| Tpr2g4687 | 838 | SUPERFAMILY | Urease, gamma-subunit | 1 | 104 | IPR036463 | GO:0016151|GO:0043419 | |
| Tpr2g4687 | 838 | CDD | Urease_alpha | 272 | 837 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Tpr2g4687 | 838 | Pfam | Urease, gamma subunit | 1 | 100 | IPR002026 | GO:0016151|GO:0043419 | |
| Tpr2g4687 | 838 | SUPERFAMILY | Composite domain of metallo-dependent hydrolases | 271 | 448 | IPR011059 | GO:0016810 | |
| Tpr2g4687 | 838 | PANTHER | UREASE | 1 | 838 | - | - | |
| Tpr2g4687 | 838 | Gene3D | Urease, beta subunit | 150 | 269 | IPR036461 | - | |
| Tpr2g4687 | 838 | CDD | Urease_beta | 132 | 232 | IPR002019 | GO:0035550|GO:0043419 | |
| Tpr2g4687 | 838 | Gene3D | - | 4 | 124 | IPR036463 | GO:0016151|GO:0043419 | |
| Tpr2g4687 | 838 | ProSitePatterns | Urease active site. | 588 | 604 | IPR017950 | GO:0009039 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr2g4687 | K01427 | - | gmx:547672 | 1436.78 |
Event-related genes