Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr2g4685 | ATGCTTCGTAGCAACCTTCCCATAATTCGAATACCAGGAGATGGCAGATGTATGTTTAGATCTGTGGTCTATGGTGCCTGCCTCAGAACAGGTGACCCACCTCCAAGTCTCACCAGGCAAAAAGAACTTGCAGATGAACTAAGAGCCAAAGTTGTGGATGAATTCATCAAGAGGAGAGCAGACACTGAGTGGTTTCTTGAAGGCGACTTTAACACCTATACCGTACAAATGAGAAAGTCTCAAGCATGGGGTGGAGAACCTGAACTTCTCATGTCATCACATGTTTTACAGAGTATGGGAAGGAGAAGCCTATTAGAGTCATTTATGATGGATTTGGCCACTATGATGTATTCAAGTGTTCGACATGATATCATACGCATAACGCGCAGTCCTAATGTTGTAACTTTGTTTTTATGA | 417 | 0.4269 | MLRSNLPIIRIPGDGRCMFRSVVYGACLRTGDPPPSLTRQKELADELRAKVVDEFIKRRADTEWFLEGDFNTYTVQMRKSQAWGGEPELLMSSHVLQSMGRRSLLESFMMDLATMMYSSVRHDIIRITRSPNVVTLFL* | 139 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr2g4685 | 138 | PANTHER | OS09G0487700 PROTEIN | 8 | 126 | - | - | |
| Tpr2g4685 | 138 | Pfam | OTU-like cysteine protease | 12 | 97 | IPR003323 | - | |
| Tpr2g4685 | 138 | SUPERFAMILY | Cysteine proteinases | 3 | 97 | IPR038765 | - | |
| Tpr2g4685 | 138 | Gene3D | - | 1 | 99 | - | - | |
| Tpr2g4685 | 138 | ProSiteProfiles | OTU domain profile. | 6 | 138 | IPR003323 | - | |
| Tpr2g4685 | 138 | PANTHER | OTU DOMAIN CONTAINING PROTEIN | 8 | 126 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr2g4685 | Tpr-Chr2 | 52163280 | 52165661 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr2g4685 | K18342 | - | gmx:100792132 | 177.948 |
Event-related genes